BAC Information

Click to search

BAC

Clone NameB6Ng01-326O16
Chromosome8 (Build37)
Map Location 63,312,331 - 63,453,223
singlet/doubletdoublet
Overlap gene2700029M09Rik, Clcn3
Upstream geneAadat, Mfap3l, LOC100040679
Downstream geneB230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, Palld, LOC100040872, BC013672
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326O16.bB6Ng01-326O16.g
ACCGA114601GA114602
length1,13565
definitionB6Ng01-326O16.b B6Ng01-326O16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,452,084 - 63,453,223)(63,312,331 - 63,312,395)
sequence
gaattcaaattttgatttttgatttatgagtaactggttggtccagtacc
aaggcaggtaactctcattcaaaatgacagacactttggcagacagtttg
gccatttcctatattaactgagcatttactgtcaggttaattaataatgc
accaaaatgtttactccagttaggtgaaatatccacatgaaaatgaggaa
aaagccaataaaacaatggaacacagaaaagcctcagcatctcagtggag
tctccctgcagtgtcacctctgtggaccgagcagctgtttctgtgtgtgt
gtcctggcctttgcactcccttacatttctgaagtccttgctcctttccc
tgtcaaacctcagcacatgtatacactttgtagttacatttgcttaagca
tgatatgcttaggtgtgctttttttaagtgttaataataccctgattgag
gtattaaagagacctagacttgaatgtgacttgatgtttcatcctcaggc
agtttttactcgtatctccctgttgtgctttgttttctgttgctatgata
aaatgctaaccaaaacaccttggtgaggaaaagggtttgttacaacttca
tgtagagaaaccaggacaggagctgaagcagaaacagaatcagagatcat
ggagcggtgctgcattttgacttaactctccccagactctttcagccacc
tttcttatcacccacagtgggttgggccctgtgtcaattagagaaagaaa
tttccccacagacatgcttacaggccaatctgatggaggcagttcctcaa
ttgagggtttctcttcccgggtgtatcagttgataatgaagatgagccat
cacaaatatttctgcagtctcctttccccattctgtgggatgcttaggag
tttctgtattttccttcttttcatttatttttccttttcatgtaaatgtt
catctaactagagtaaatattttggtgcattatagctgaatcttatggtc
aaggtagatttacattataggaatggccaaactgttcttccaaagtgtcc
gtcattttgatgagagttcaggtgctgcttcctcatcagcaattattggg
tagtgtcagttgtttttggagttatccacctatgt
tgctcatgtgtgcagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_63452084_63453223
seq2: B6Ng01-326O16.b_49_1183 (reverse)

seq1  ACATA-GTGGATAAACTCCAAAA--CACTGACACTACCAAATAAATGCTG  47
      ||||| |||||| ||||||||||   |||||||||||| ||||| |||||
seq2  ACATAGGTGGAT-AACTCCAAAAACAACTGACACTACCCAATAATTGCTG  49

seq1  ATGAGGAAGCAGGCACCTGGAACTCTCAATCAAAATGACGGACACTTTGG  97
      ||||||||||| |||||| |||||||| ||||||||||||||||||||||
seq2  ATGAGGAAGCA-GCACCT-GAACTCTC-ATCAAAATGACGGACACTTTGG  96

seq1  AAGAACAGTTTGGCCATTTCCTATAATGTTAAATCTACCTTGACCATAAG  147
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  AAGAACAGTTTGGCCA-TTCCTATAATG-TAAATCTACCTTGACCATAAG  144

seq1  ATTCAGCTATAATGCACCAAAATATTTACTCTAGTTAGATGAAACATTTA  197
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTCAGCTATAATGCACCAAAATATTTACTCTAGTTAGATG-AACATTTA  193

seq1  CATGAAAAGGAAAAATAAATGAAAAGAAGGAAAATACAGAAACTCCTAAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAGGAAAAATAAATGAAAAGAAGGAAAATACAGAAACTCCTAAG  243

seq1  CATCCCACAGAATGGGGAAAGGAGACTGCAGAAATATTTGTGATGGCTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACAGAATGGGGAAAGGAGACTGCAGAAATATTTGTGATGGCTCA  293

seq1  TCTTCATTATCAACCTGATACACCCGGGAAGAGAAACCCTCAATTGAGGA  347
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTATCAA-CTGATACACCCGGGAAGAGAAACCCTCAATTGAGGA  342

seq1  ACTGCCTCCATCAGATTGGCCTGTAAGCATGTCTGTGGGGAAATTTCTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTCCATCAGATTGGCCTGTAAGCATGTCTGTGGGGAAATTTCTTT  392

seq1  CTCTAATTGACACAGGGCCCAACCCACTGTGGGTGATAAGAAAGGTGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTGACACAGGGCCCAACCCACTGTGGGTGATAAGAAAGGTGGCT  442

seq1  GAAAGAGTCTGGGGAGAGTTAAGTCAAAATGCAGCACCGCTCCATGATCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTCTGGGGAGAGTTAAGTCAAAATGCAGCACCGCTCCATGATCT  492

seq1  CTGATTCTGTTTCTGCTTCAGCTCCTGTCCTGGTTTCTCTACATGAAGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCTGTTTCTGCTTCAGCTCCTGTCCTGGTTTCTCTACATGAAGTT  542

seq1  GTAACAAACCCTTTTCCTCACCAAGGTGTTTTGGTTAGCATTTTATCATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAACCCTTTTCCTCACCAAGGTGTTTTGGTTAGCATTTTATCATA  592

seq1  GCAACAGAAAACAAAGCACAACAGGGAGATACGAGTAAAAACTGCCTGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGAAAACAAAGCACAACAGGGAGATACGAGTAAAAACTGCCTGAG  642

seq1  GATGAAACATCAAGTCACATTCAAGTCTAGGTCTCTTTAATACCTCAATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAACATCAAGTCACATTCAAGTCTAGGTCTCTTTAATACCTCAATC  692

seq1  AGGGTATTATTAACACTTAAAAAAAGCACACCTAAGCATATCATGCTTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATTATTAACACTTAAAAAAAGCACACCTAAGCATATCATGCTTAA  742

seq1  GCAAATGTAACTACAAAGTGTATACATGTGCTGAGGTTTGACAGGGAAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTAACTACAAAGTGTATACATGTGCTGAGGTTTGACAGGGAAAG  792

seq1  GAGCAAGGACTTCAGAAATGTAAGGGAGTGCAAAGGCCAGGACACACACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGGACTTCAGAAATGTAAGGGAGTGCAAAGGCCAGGACACACACA  842

seq1  CAGAAACAGCTGCTCGGTCCACAGAGGTGACACTGCAGGGAGACTCCACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAGCTGCTCGGTCCACAGAGGTGACACTGCAGGGAGACTCCACT  892

seq1  GAGATGCTGAGGCTTTTCTGTGTTCCATTGTTTTATTGGCTTTTTCCTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTGAGGCTTTTCTGTGTTCCATTGTTTTATTGGCTTTTTCCTCA  942

seq1  TTTTCATGTGGATATTTCACCTAACTGGAGTAAACATTTTGGTGCATTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGTGGATATTTCACCTAACTGGAGTAAACATTTTGGTGCATTAT  992

seq1  TAATTAACCTGACAGTAAATGCTCAGTTAATATAGGAAATGGCCAAACTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACCTGACAGTAAATGCTCAGTTAATATAGGAAATGGCCAAACTG  1042

seq1  TCTGCCAAAGTGTCTGTCATTTTGAATGAGAGTTACCTGCCTTGGTACTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAAAGTGTCTGTCATTTTGAATGAGAGTTACCTGCCTTGGTACTG  1092

seq1  GACCAACCAGTTACTCATAAATCAAAAATCAAAATTTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAACCAGTTACTCATAAATCAAAAATCAAAATTTGAATTC  1135

seq1: chr8_63312331_63312395
seq2: B6Ng01-326O16.g_71_135

seq1  TGCTCATGTGTGCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATGTGTGCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  GTGTGTGTATGTGTG  65
      |||||||||||||||
seq2  GTGTGTGTATGTGTG  65