BAC Information

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BAC

Clone NameB6Ng01-328M19
Chromosome8 (Build37)
Map Location 113,484,500 - 113,614,639
singlet/doubletdoublet
Overlap geneSt3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl
Upstream geneMarveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin, LOC672398, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk
Downstream gene4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328M19.bB6Ng01-328M19.g
ACCGA115961GA115962
length1,078964
definitionB6Ng01-328M19.b B6Ng01-328M19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,484,500 - 113,485,597)(113,613,676 - 113,614,639)
sequence
gaattcttgtctcagaggcagacttctgctccagaaaggtgtcgggttcc
ctgagcagctcctacttgtccacagacccagggggctgtgcctccatctg
cagcaatgctgttattgctgagtgtcaagggcaggccttggggtatatag
gcaagtgctccatcccagagtgacttctctctgcttgttggtccacagcg
ttgcttttcttgcttttgttttttgcttgcttgtttttaaatatttattt
atctattttatatatatgatgagtacactgtcactctcttcagacacacc
agagagggcatcggatctcattacagatggttgtgagccaccatgtggtt
gctgggaattgaactcaggacctctggaagagcaatcagtgctcttaacc
gctgagccatctctccagcctctgcttatttgtttttgagacagggttgc
tctgtgtatccctgactgtcctggtactcactctagcccttgaactcaga
gattgcctgcctctgtctcccaagcacagagatcactgcccagttttttt
ttttttttttttttatttttgagacatccataatttggcctgactctcct
ccgaatcttgagtgttgagattataggtatataccattgcatttggcttg
tttttgttcttgttttgagacagggtcctatctaaccctgactgacctgg
aacacactatgtagaccagactagctttgaactcacagggatctgccgtc
tctgcctcttcagtgcggaggcgtgtgccaccatacctgacactgctctg
ttcctttgcgacagggtttcattctgtcttccccgtggcctcaaacttag
gatcctctggcctcagcctcctgagagctctcagtggttttttttttatt
ttatttattccattttgttttctgtgtcgtcctggctgtcctagagctcg
ctctggagagcaggcagctgcttctttttgcttatggcatttcaaagtct
agttcaagtattcaagtgtagtgatggccctatatcatgaaacagtctag
caatgtcttaaaatatttatctacaata
gaattcaaaatctcacgaccccagatgcctctcccaacttttctggaaag
gccctttcgtctcttaaatactcaatattcagctgatgaaagttccatct
ccttggtggaacattgcctttccaagaaactggggtcccttggtgtttcc
acagtcttctttcctttcttttaaaaaagctttttaggggtctggagaga
tggttctgtggttaagagcactgactactctcccagaggacctggatttg
gatcccagcaaccacacatggcagctcaccactatctgtaattccagatc
caggggctctgatacctccactcaggtgagtgtgttttaaagtttattaa
aagatctttttttcccccaatcttaactgatttaactgtaattgccccac
agaccagatgggacttggttctgcttatgtcctcaggctgaccactaggt
ggcgctggaacctgtgtattgaagtgacctggctgcctgtatcccttata
cttcgttgagtgaactgttagggttaattagaaactgaccatctagtgat
tgccatatgcagggatccatcccataatcagcttccaaatgctgacacca
ttgcatacactagcaagattttgctgaaaggacccagatatagctctctc
ttgtgagactatgccggggcctagcaaacacagaagtggatgatcacagt
cagctattggatgtgtcacacggccccttatggaggagctagagaaatta
cccaaggagctaaagggaactgcaaccctataggtggaacaacaatatga
actaaccagtacccgggagctcttgtctttagctgcatatgtatcaaaag
atggcctagtcggtcatcactgcaaagaggcccattggacttgcaaactt
tatatgccccagtacaggggaacaccagggccaaaaaggggcagtgggtg
ggtaggggattggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_113484500_113485597
seq2: B6Ng01-328M19.b_48_1125

seq1  GAATTCTTGTCTCAGAGGCAGACTTCTGCTCCAGAAAGGTGTCGGGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTCAGAGGCAGACTTCTGCTCCAGAAAGGTGTCGGGTTCC  50

seq1  CTGAGCAGCTCCTACTTGTCCACAGACCCAGGGGGCTGTGCCTCCATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGCTCCTACTTGTCCACAGACCCAGGGGGCTGTGCCTCCATCTG  100

seq1  CAGCAATGCTGTTATTGCTGAGTGTCAAGGGCAGGCCTTGGGGTATATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGCTGTTATTGCTGAGTGTCAAGGGCAGGCCTTGGGGTATATAG  150

seq1  GCAAGTGCTCCATCCCAGAGTGACTTCTCTCTGCTTGTTGGTCCACAGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGCTCCATCCCAGAGTGACTTCTCTCTGCTTGTTGGTCCACAGCG  200

seq1  TTGCTTTTCTTGCTTTTGTTTTTTGCTTGCTTGTTTTTAAATATTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTCTTGCTTTTGTTTTTTGCTTGCTTGTTTTTAAATATTTATTT  250

seq1  ATCTATTTTATATATATGATGAGTACACTGTCACTCTCTTCAGACACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTATATATATGATGAGTACACTGTCACTCTCTTCAGACACACC  300

seq1  AGAGAGGGCATCGGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGCATCGGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTT  350

seq1  GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCAGTGCTCTTAACC  400

seq1  GCTGAGCCATCTCTCCAGCCTCTGCTTATTTGTTTTTGAGACAGGGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCCATCTCTCCAGCCTCTGCTTATTTGTTTTTGAGACAGGGTTGC  450

seq1  TCTGTGTATCCCTGACTGTCCTGGTACTCACTCTAGCCCTTGAACTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTATCCCTGACTGTCCTGGTACTCACTCTAGCCCTTGAACTCAGA  500

seq1  GATTGCCTGCCTCTGTCTCCCAAGCACAGAGATCACTGCCCAGTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCTGCCTCTGTCTCCCAAGCACAGAGATCACTGCCCAGTTTTTTT  550

seq1  TTTTTTTTTTTTTTATTTTTGAGACATCCATAATTTGGCCTGACTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTATTTTTGAGACATCCATAATTTGGCCTGACTCTCCT  600

seq1  CCGAATCTTGAGTGTTGAGATTATAGGTATATACCATTGCATTTGGCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATCTTGAGTGTTGAGATTATAGGTATATACCATTGCATTTGGCTTG  650

seq1  TTTTTGTTCTTGTTTTGAGACAGGGTCCTATCTAACCCTGACTGACCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTCTTGTTTTGAGACAGGGTCCTATCTAACCCTGACTGACCTGG  700

seq1  AACACACTATGTAGACCAGACTAGCTTTGAACTCACAGGGATCTGCCGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTATGTAGACCAGACTAGCTTTGAACTCACAGGGATCTGCCGTC  750

seq1  TCTGCCTCTTCAGTGCGGAGGCGTGTGCCACCATACCTGACACTGCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCTTCAGTGCGGAGGCGTGTGCCACCATACCTGACACTGCTCTG  800

seq1  TTCCTTTGCGACAGGGTTTCATTCTGTCTTCCCCGTGGCCTCAAACTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGCGACAGGGTTTCATTCTGTCTTCCCCGTGGCCTCAAACTTAG  850

seq1  GATCCTCTGGCCTCAGCCTCCTGAGAGCTCTCAGTGGTTTTTTTTTTTTA  900
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  GATCCTCTGGCCTCAGCCTCCTGAGAGCTCTCAGTGG--TTTTTTTTTTA  898

seq1  TTTTATTTTATTCCATTTTGTTTTTCTGTGTCGTCCTGGCTGTCCTAGAG  950
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTTA-TTTATTCCATTTTG-TTTTCTGTGTCGTCCTGGCTGTCCTAGAG  946

seq1  CTCGCTCTGGAGAGCAGGCAGGCTTGCTTCTTTTTGCTTATGGCATTTCA  1000
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  CTCGCTCTGGAGAGCAGGCAG--CTGCTTCTTTTTGCTTATGGCATTTCA  994

seq1  AAGTCTTAGTTTCAAAGTATTTCAAAGTGTTAGTTGATGGCCCTATATCA  1050
      ||||| |||||   |||||||   ||||| ||| ||||||||||||||||
seq2  AAGTC-TAGTT--CAAGTATT--CAAGTG-TAG-TGATGGCCCTATATCA  1037

seq1  TGAAACAAGTCTAGCCCAGTGTCTTTAAAAATATTTATACTACCAATA  1098
      |||||| |||||||  || ||||||  ||||||||||| ||| |||||
seq2  TGAAAC-AGTCTAG--CAATGTCTT--AAAATATTTAT-CTA-CAATA  1078

seq1: chr8_113613676_113614639
seq2: B6Ng01-328M19.g_68_1031 (reverse)

seq1  CCCAATCCCCTACCCACCCACTGCCCCTTTTTGGCCCTGGTGTTCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCCCCTACCCACCCACTGCCCCTTTTTGGCCCTGGTGTTCCCCTG  50

seq1  TACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTTGCAGTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTTTGCAGTGATG  100

seq1  ACCGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCC  150

seq1  GGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCC  200

seq1  TTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATAAGGGGCCGTGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATAAGGGGCCGTGTGAC  250

seq1  ACATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCCCG  300

seq1  GCATAGTCTCACAAGAGAGAGCTATATCTGGGTCCTTTCAGCAAAATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTCTCACAAGAGAGAGCTATATCTGGGTCCTTTCAGCAAAATCTT  350

seq1  GCTAGTGTATGCAATGGTGTCAGCATTTGGAAGCTGATTATGGGATGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGTATGCAATGGTGTCAGCATTTGGAAGCTGATTATGGGATGGAT  400

seq1  CCCTGCATATGGCAATCACTAGATGGTCAGTTTCTAATTAACCCTAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATATGGCAATCACTAGATGGTCAGTTTCTAATTAACCCTAACAG  450

seq1  TTCACTCAACGAAGTATAAGGGATACAGGCAGCCAGGTCACTTCAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCAACGAAGTATAAGGGATACAGGCAGCCAGGTCACTTCAATACA  500

seq1  CAGGTTCCAGCGCCACCTAGTGGTCAGCCTGAGGACATAAGCAGAACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCCAGCGCCACCTAGTGGTCAGCCTGAGGACATAAGCAGAACCAA  550

seq1  GTCCCATCTGGTCTGTGGGGCAATTACAGTTAAATCAGTTAAGATTGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATCTGGTCTGTGGGGCAATTACAGTTAAATCAGTTAAGATTGGGG  600

seq1  GAAAAAAAGATCTTTTAATAAACTTTAAAACACACTCACCTGAGTGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAGATCTTTTAATAAACTTTAAAACACACTCACCTGAGTGGAGG  650

seq1  TATCAGAGCCCCTGGATCTGGAATTACAGATAGTGGTGAGCTGCCATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGCCCCTGGATCTGGAATTACAGATAGTGGTGAGCTGCCATGTG  700

seq1  TGGTTGCTGGGATCCAAATCCAGGTCCTCTGGGAGAGTAGTCAGTGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTGGGATCCAAATCCAGGTCCTCTGGGAGAGTAGTCAGTGCTCT  750

seq1  TAACCACAGAACCATCTCTCCAGACCCCTAAAAAGCTTTTTTAAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACAGAACCATCTCTCCAGACCCCTAAAAAGCTTTTTTAAAAGAAA  800

seq1  GGAAAGAAGACTGTGGAAACACCAAGGGACCCCAGTTTCTTGGAAAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAGACTGTGGAAACACCAAGGGACCCCAGTTTCTTGGAAAGGCA  850

seq1  ATGTTCCACCAAGGAGATGGAACTTTCATCAGCTGAATATTGAGTATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCACCAAGGAGATGGAACTTTCATCAGCTGAATATTGAGTATTTA  900

seq1  AGAGACGAAAGGGCCTTTCCAGAAAAGTTGGGAGAGGCATCTGGGGTCGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGAAAGGGCCTTTCCAGAAAAGTTGGGAGAGGCATCTGGGGTCGT  950

seq1  GAGATTTTGAATTC  964
      ||||||||||||||
seq2  GAGATTTTGAATTC  964