BAC Information

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BAC

Clone NameB6Ng01-329L14
Chromosome8 (Build37)
Map Location 84,774,081 - 84,863,892
singlet/doubletdoublet
Overlap geneIl15
Upstream geneLOC384852, Inpp4b, LOC671182
Downstream geneEG666564, LOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329L14.bB6Ng01-329L14.g
ACCGA116603GA116604
length1,176940
definitionB6Ng01-329L14.b B6Ng01-329L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,862,732 - 84,863,892)(84,774,081 - 84,774,686)
sequence
gaattcaatatgagtagaaggaaggaaaaaatagatctgggagcaggcat
taatgaaactgaaatcaggaagtcagggggcaaatcaatgaaacataaag
gcactagtaaaaaaaaatcaataaaatttgtaaacatctaacaataatag
agatggtaccaggcaccatggatggaattggtggcgattgacacaggatc
tgtggggataacatttgtcactgtttccctcagtgtcttataactgtacc
aatgatttacaggaaatggaaacattcttcaaagatcatgaactccccaa
aacataacaatgatgaaactggtggttcaagagctcctacaactcctgac
actgttcaggtcaccatggagagcctcctagaagaacacttgggagcgac
tagccttgctctatcatcctgaaacttacttcaaacattgatcatgcctc
ccccccccccccaggaagaagcaagtccctctaattcagtttaggagact
aatcttaccttgatgtgaaaacttgataaagatacattttaaaaaatgaa
accaaatataagcaactctcatgtacttagtataaaattcctcagtacaa
tatcaacctatcagatctaccagtgtattataaaaagaatcctatatcat
cactgtatagaatttagaatttattctagttatgcaagtcttttgattat
ttcaagaactatcagtcaactcaggctgacatatcaggggccaaaaagga
aaatcatatcaattgatttagaaaagacatgataaatttagtacctctta
tacaggatggattttccttttttaatgaatgtccatatcccattgtgtga
ctgtcttttgacagagggtctttaaagagaaatttaagtgaaaacaggtc
cattaggatgattctaatctaatatgtccagtttccttagaagggcagga
aaccatgctccaagaagggttatccacaaggaggagataccctgaggaga
cagagagaggatagggatagggataagaattgataaggcaaagtgagaag
ttcttggggagaccactccttaacattctccattctggaggactgattgt
ctttcagattcgagaaaaggtacatgtcttaacttacgcctatccagcct
atatatgaacttgtttatagcagctt

gaattctcttctcctagaacattaaggaggaacagataagcatcattttt
atctgaagataactagtaattgtgagtgtattattaagtattgttaagtc
ttatatgtgtatggggcattgggctatacacagacagtctggtctccagt
caagctgaagtctgaactccggagtggtgatgattcacctatatgacatg
gtaggcattccctcatgtctcctggactcgaagctactgtcaaagctact
gctcccacagcccccacaggagaagcatggttagtagtcacatagacaat
gtcccaagcttctgaccttcaggctagactcctcccagttacctagcaac
agacaagataacagcccaccataagagttgctgcttaaccccaccttact
ctcttactctctcctctcctctctcctcatcctctcctttcactctctta
cttactctctctttcttactctctagcctttcttctctctcttctttccc
ccttctctcctcttgaccatttctagtccatctctttttctactttcact
ctttccccctgcctttctacaaaaaagctataaaaccatagactgtttaa
caagacccgctgtgcttggatgatgggataggctttctcctaatgagcca
tttctaatctcctgatggaaggccttcctgtgttccagtcaaggcctgga
ctaaggactctcacctgtgtgggaacctctctccctcagccctctgtccc
ataaccctggggctgtgggtgttgcccaggggcccctcgtttcggggtct
gccccttgtcaccctctgccaagtggggtcagtggcttagatgcccaccg
aggctgagtggaaagcatctggcagtcctcctgagtccacctgcccagag
catactaatatatatatatatatatatatatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84862732_84863892
seq2: B6Ng01-329L14.b_47_1222 (reverse)

seq1  AAGCTGCTAT-AACAATTTCATATAT--GCTGGATA-GCGTAAGTAAAGA  46
      |||||||||| ||||| |||||||||  |||||||| |||||||| ||||
seq2  AAGCTGCTATAAACAAGTTCATATATAGGCTGGATAGGCGTAAGTTAAGA  50

seq1  CATGTA-CTTTTCTCGAATTCTG-AAGACAATCAGTC--TCAG-ATGGAG  91
      |||||| ||||||||||| |||| |||||||||||||   ||| ||||||
seq2  CATGTACCTTTTCTCGAA-TCTGAAAGACAATCAGTCCTCCAGAATGGAG  99

seq1  -ATGTT-AGGAGTGGTCT-CCCAAG-ACTTCTCACTTTGCCTTATCAATT  137
       ||||| ||||||||||| |||||| ||||||||||||||||||||||||
seq2  AATGTTAAGGAGTGGTCTCCCCAAGAACTTCTCACTTTGCCTTATCAATT  149

seq1  CTTAT-CCTAT-CCTATCCTCTCTCTGTCTCCTCAGGGTATCTTCCTCC-  184
      ||||| ||||| |||||||||||||||||||||||||||||| |||||| 
seq2  CTTATCCCTATCCCTATCCTCTCTCTGTCTCCTCAGGGTATC-TCCTCCT  198

seq1  TGTGGAT-ACCCTTCTTGGAGCATGGTTTCCTGCCCTTCTAAGGAAACTG  233
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATAACCCTTCTTGGAGCATGGTTTCCTGCCCTTCTAAGGAAACTG  248

seq1  GACATATTAGATTAGAATCATCCTAATGGACCTGTTTTCACTTAAATTTC  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTAGATTAGAATCATCCTAATGGACCTGTTTTCACTTAAATTTC  298

seq1  TCTTTAAAGACCCTCTGTCAAAAGACAGTCACACAATGGGATATGGACAT  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAGACCCTCTGTCAAAAGACAGTCACACAATGGGATATGGACAT  348

seq1  TCATTAAAAAAGGAAAATCCATCCTGTATAAGAGGTACTAAATTTATCAT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAAAGGAAAATCCATCCTGTATAAGAGGTACTAAATTTATCAT  398

seq1  GTCTTTTCTAAATCAATTGATATGATTTTCCTTTTTGGCCCCTGATATGT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCTAAATCAATTGATATGATTTTCCTTTTTGGCCCCTGATATGT  448

seq1  CAGCCTGAGTTGACTGATAGTTCTTGAAATAATCAAAAGACTTGCATAAC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGAGTTGACTGATAGTTCTTGAAATAATCAAAAGACTTGCATAAC  498

seq1  TAGAATAAATTCTAAATTCTATACAGTGATGATATAGGATTCTTTTTATA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAAATTCTAAATTCTATACAGTGATGATATAGGATTCTTTTTATA  548

seq1  ATACACTGGTAGATCTGATAGGTTGATATTGTACTGAGGAATTTTATACT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGGTAGATCTGATAGGTTGATATTGTACTGAGGAATTTTATACT  598

seq1  AAGTACATGAGAGTTGCTTATATTTGGTTTCATTTTTTAAAATGTATCTT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATGAGAGTTGCTTATATTTGGTTTCATTTTTTAAAATGTATCTT  648

seq1  TATCAAGTTTTCACATCAAGGTAAGATTAGTCTCCTAAACTGAATTAGAG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTTTTCACATCAAGGTAAGATTAGTCTCCTAAACTGAATTAGAG  698

seq1  GGACTTGCTTCTTCCTGGGGGGGGGGGGGAGGCATGATCAATGTTTGAAG  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCTTCTTCCTGGGGGGGGGGGGGAGGCATGATCAATGTTTGAAG  748

seq1  TAAGTTTCAGGATGATAGAGCAAGGCTAGTCGCTCCCAAGTGTTCTTCTA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCAGGATGATAGAGCAAGGCTAGTCGCTCCCAAGTGTTCTTCTA  798

seq1  GGAGGCTCTCCATGGTGACCTGAACAGTGTCAGGAGTTGTAGGAGCTCTT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTCTCCATGGTGACCTGAACAGTGTCAGGAGTTGTAGGAGCTCTT  848

seq1  GAACCACCAGTTTCATCATTGTTATGTTTTGGGGAGTTCATGATCTTTGA  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACCAGTTTCATCATTGTTATGTTTTGGGGAGTTCATGATCTTTGA  898

seq1  AGAATGTTTCCATTTCCTGTAAATCATTGGTACAGTTATAAGACACTGAG  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTTCCATTTCCTGTAAATCATTGGTACAGTTATAAGACACTGAG  948

seq1  GGAAACAGTGACAAATGTTATCCCCACAGATCCTGTGTCAATCGCCACCA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGTGACAAATGTTATCCCCACAGATCCTGTGTCAATCGCCACCA  998

seq1  ATTCCATCCATGGTGCCTGGTACCATCTCTATTATTGTTAGATGTTTACA  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCCATGGTGCCTGGTACCATCTCTATTATTGTTAGATGTTTACA  1048

seq1  AATTTTATTGATTTTTTTTTACTAGTGCCTTTATGTTTCATTGATTTGCC  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTGATTTTTTTTTACTAGTGCCTTTATGTTTCATTGATTTGCC  1098

seq1  CCCTGACTTCCTGATTTCAGTTTCATTAATGCCTGCTCCCAGATCTATTT  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACTTCCTGATTTCAGTTTCATTAATGCCTGCTCCCAGATCTATTT  1148

seq1  TTTCCTTCCTTCTACTCATATTGAATTC  1161
      ||||||||||||||||||||||||||||
seq2  TTTCCTTCCTTCTACTCATATTGAATTC  1176


seq1: chr8_84774081_84774686
seq2: B6Ng01-329L14.g_69_674

seq1  GAATTCTCTTCTCCTAGAACATTAAGGAGGAACAGATAAGCATCATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTCCTAGAACATTAAGGAGGAACAGATAAGCATCATTTTT  50

seq1  ATCTGAAGATAACTAGTAATTGTGAGTGTATTATTAAGTATTGTTAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGATAACTAGTAATTGTGAGTGTATTATTAAGTATTGTTAAGTC  100

seq1  TTATATGTGTATGGGGCATTGGGCTATACACAGACAGTCTGGTCTCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTGTATGGGGCATTGGGCTATACACAGACAGTCTGGTCTCCAGT  150

seq1  CAAGCTGAAGTCTGAACTCCGGAGTGGTGATGATTCACCTATATGACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGAAGTCTGAACTCCGGAGTGGTGATGATTCACCTATATGACATG  200

seq1  GTAGGCATTCCCTCATGTCTCCTGGACTCGAAGCTACTGTCAAAGCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCATTCCCTCATGTCTCCTGGACTCGAAGCTACTGTCAAAGCTACT  250

seq1  GCTCCCACAGCCCCCACAGGAGAAGCATGGTTAGTAGTCACATAGACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCACAGCCCCCACAGGAGAAGCATGGTTAGTAGTCACATAGACAAT  300

seq1  GTCCCAAGCTTCTGACCTTCAGGCTAGACTCCTCCCAGTTACCTAGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAGCTTCTGACCTTCAGGCTAGACTCCTCCCAGTTACCTAGCAAC  350

seq1  AGACAAGATAACAGCCCACCATAAGAGTTGCTGCTTAACCCCACCTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGATAACAGCCCACCATAAGAGTTGCTGCTTAACCCCACCTTACT  400

seq1  CTCTTACTCTCTCCTCTCCTCTCTCCTCATCCTCTCCTTTCACTCTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTCTCTCCTCTCCTCTCTCCTCATCCTCTCCTTTCACTCTCTTA  450

seq1  CTTACTCTCTCTTTCTTACTCTCTAGCCTTTCTTCTCTCTCTTCTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCTCTCTTTCTTACTCTCTAGCCTTTCTTCTCTCTCTTCTTTCCC  500

seq1  CCTTCTCTCCTCTTGACCATTTCTAGTCCATCTCTTTTTCTACTTTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTCCTCTTGACCATTTCTAGTCCATCTCTTTTTCTACTTTCACT  550

seq1  CTTTCCCCCTGCCTTTCTACAAAAAAGCTATAAAACCATAGACTGTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCCCTGCCTTTCTACAAAAAAGCTATAAAACCATAGACTGTTTAA  600

seq1  CAAGAC  606
      ||||||
seq2  CAAGAC  606


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