BAC Information

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BAC

Clone NameB6Ng01-329M21
Chromosome8 (Build37)8 (Build37)
Map Location 95,880,711 - 95,881,89296,021,104 - 96,021,746
singlet/doubletsingletsinglet
Overlap gene2310039D24Rik
Upstream gene4933436C20Rik, Irx5, Irx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778, Ces1
Downstream geneCes7, Gnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329M21.bB6Ng01-329M21.g
ACCGA116663GA116664
length1,167643
definitionB6Ng01-329M21.b B6Ng01-329M21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(95,880,711 - 95,881,892)(96,021,104 - 96,021,746)
sequence
gaattcactgctcacatctacatctcaccattggattccactacttacag
aaactgaacagaacagagtccttcctgaagcaaactctgaggcctccacc
acaagaagctttcatttgtctatcctgagaggtgaaatatatagagatca
aagcaggtctttggcttccatacaacctgtttgactcacctctgtggcca
cgagacacaatcacagatggtataccaaacatcacatccccaatcaactg
taggagccagactctattttggatggggtcatctgtgccttttgagtatt
tctcaatggcaactggaattccatcctctggtatgttctgaaacagatga
agaaagtgaccacctccaactgatcagtgtgtttgtttgtttgtttgttt
gtttgtttgtttctagccaatcgcgaaggctgggttaattgtgaaattct
gggccctgtataaatcccttctgaggtgatagaatcagaaagttggaaaa
aaaataggtacagaatccctgtgtcagtcattttctgaaattgcaatggt
ctataatttggcccaactcctcagccaattaccagaaaaatcacaagatg
cttacaaagaaatacgccaacttcctcaggaacagagagatgaccttctt
gtccagttttacatcagttggtggaaattccattatctgtttttaaaaaa
gagttaagtatttgggagttaacgggagtagacaaccagggaaaccatcc
tgcctactgtgggatgtaggctctagctgctcctcagtggctgtggctct
cccatgagtttgataaaatcaataaaacaattagatttctacatagaaat
taaggaaataaataaagacacttgggtacttatttatccggctagaggaa
cactgctctctgagcagtggaggaacatttagacaaagtaaagttgaagc
agaaagtttaagatagaggacagctgagtcctcacagactctgctgagta
gaaagtcacccttacaacaattgttgctgggttctttgatatctgaagtc
tccagtgaaagccagcaaaatctcagtggttactgaatgcattcaaacta
ttctcgaggtcctggcctcagcatttttccgaaccttaggtactatagac
tcttcgatgcactgata
gaattcctggcctgatttccatcagggatggacagggacatggaagttgt
aagctgacataaatgctttccccccctcaacttgcttttgttgaaggtgt
ttaacacagttgcaatagcaacttcactgtgcccagcacagaatctagaa
tctggaattgtccagagaattaagcacctggcctaggttctgacagcgat
cgatcactgaagctcaggaggtgactgcggtgaccgtgactcttgatcaa
tctagtgcctgtcacctagctggcgatagtggtcaagatagttgtcgtat
gttaccaagtgactatcgatggtgcatttcccacacaagtagtctgtttt
caggtatggatcattttgcagacagagaagtaggctgttaatgtttccct
acttaactaatttttattttgtcatcatttatttttttagtacactgaca
tgtttcccacaattacttttaatttattgcatgtaatactggctttccat
ttataaaaatgagtgtctgaaattgaaaaaataattagtgcttttaaaga
actttaaagaagacacagtgacggaaatggtctgctgatacagtgtgaac
cttcaaatataaagcagaacgggcgggagtgggggaggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_95880711_95881892
seq2: B6Ng01-329M21.b_45_1211

seq1  GAATTCACTGCTCACATCTACATCTCACCATTGGATTCCACTACTTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTCACATCTACATCTCACCATTGGATTCCACTACTTACAG  50

seq1  AAACTGAACAGAACAGAGTCCTTCCTGAAGCAAACTCTGAGGCCTCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAACAGAACAGAGTCCTTCCTGAAGCAAACTCTGAGGCCTCCACC  100

seq1  ACAAGAAGCTTTCATTTGTCTATCCTGAGAGGTGAAATATATAGAGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAGCTTTCATTTGTCTATCCTGAGAGGTGAAATATATAGAGATCA  150

seq1  AAGCAGGTCTTTGGCTTCCATACAACCTGTTTGACTCACCTCTGTGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTCTTTGGCTTCCATACAACCTGTTTGACTCACCTCTGTGGCCA  200

seq1  CGAGACACAATCACAGATGGTATACCAAACATCACATCCCCAATCAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACACAATCACAGATGGTATACCAAACATCACATCCCCAATCAACTG  250

seq1  TAGGAGCCAGACTCTATTTTGGATGGGGTCATCTGTGCCTTTTGAGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCAGACTCTATTTTGGATGGGGTCATCTGTGCCTTTTGAGTATT  300

seq1  TCTCAATGGCAACTGGAATTCCATCCTCTGGTATGTTCTGAAACAGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATGGCAACTGGAATTCCATCCTCTGGTATGTTCTGAAACAGATGA  350

seq1  AGAAAGTGACCACCTCCAACTGATCAGTGTGTTTGTTTGTTTGTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGACCACCTCCAACTGATCAGTGTGTTTGTTTGTTTGTTTGTTT  400

seq1  GTTTGTTTGTTTCTAGCCAATCGCGAAGGCTGGGTTAATTGTGAAATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTCTAGCCAATCGCGAAGGCTGGGTTAATTGTGAAATTCT  450

seq1  GGGCCCTGTATAAATCCCTTCTGAGGTGATAGAATCAGAAAGTTGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTGTATAAATCCCTTCTGAGGTGATAGAATCAGAAAGTTGGAAAA  500

seq1  AAAATAGGTACAGAATCCCTGTGTCAGTCATTTTCTGAAATTGCAATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGTACAGAATCCCTGTGTCAGTCATTTTCTGAAATTGCAATGGT  550

seq1  CTATAATTTGGCCCAACTCCTCAGCCAATTACCAGAAAAATCACAAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATTTGGCCCAACTCCTCAGCCAATTACCAGAAAAATCACAAGATG  600

seq1  CTTACAAAGAAATACGCCAACTTCCTCAGGAACAGAGAGATGACCTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAAGAAATACGCCAACTTCCTCAGGAACAGAGAGATGACCTTCTT  650

seq1  GTCCAGTTTTACATCAGTTGGTGGAAATTCCATTATCTGTTTTTAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTTTTACATCAGTTGGTGGAAATTCCATTATCTGTTTTTAAAAAA  700

seq1  GAGTTAAGTATTTGGGAGTTAACGGGAGTAGACAACCAGGGAAACCATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAGTATTTGGGAGTTAACGGGAGTAGACAACCAGGGAAACCATCC  750

seq1  TGCCTACTGTGGGATGTAGGCTCTAGCTGCTCCTCAGTGGCTGTGGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTGTGGGATGTAGGCTCTAGCTGCTCCTCAGTGGCTGTGGCTCT  800

seq1  CCCATGAGTTTGATAAAATCAATAAAACAATTAGATTTCTACATAGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGTTTGATAAAATCAATAAAACAATTAGATTTCTACATAGAAAT  850

seq1  TAAGGAAATAAATAAAGACACTTGGGTACTTATTTATCCGGCTAGAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAATAAATAAAGACACTTGGGTACTTATTTATCCGGCTAGAGGAA  900

seq1  CACTGCTCCTCTGAGCAGTGGAGGAACATTTAGACAAAGTAAAGTTGAAG  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCT-CTCTGAGCAGTGGAGGAACATTTAGACAAAGTAAAGTTGAAG  949

seq1  CAGAAAGTTTAAGGATAGAGGAACAGGCTGAGTCCTCACAGACTCTGCTG  1000
      |||||||||||| |||||||| ||| ||||||||||||||||||||||||
seq2  CAGAAAGTTTAA-GATAGAGG-ACA-GCTGAGTCCTCACAGACTCTGCTG  996

seq1  AGTAAGAAAGTCACCCTTACAACCATTGTTGCTGGGTTCTTTGATATCTG  1050
      ||| ||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGT-AGAAAGTCACCCTTACAACAATTGTTGCTGGGTTCTTTGATATCTG  1045

seq1  AAGTCCTCCAGTGAGAG-CAGCAAAACCCTCAGTGTGTAACTGATGCCAT  1099
      |||| ||||||||| || ||||||||  ||||||| || |||||   |||
seq2  AAGT-CTCCAGTGAAAGCCAGCAAAA-TCTCAGTG-GTTACTGAATGCAT  1092

seq1  CCAAAACTATTCTCAGAGTCCTGGCCTCCAGCATTTTTTCAGAAACTTAA  1149
       | |||||||||||   |||||||||| ||||| |||||| ||| ||| |
seq2  TC-AAACTATTCTCGAGGTCCTGGCCT-CAGCA-TTTTTCCGAACCTT-A  1138

seq1  GGTACTATAAAACTCTTCTATGCCAGCCTGATA  1182
      |||||||| | ||||||| ||||    ||||||
seq2  GGTACTAT-AGACTCTTCGATGC---ACTGATA  1167

seq1: chr8_96021104_96021746
seq2: B6Ng01-329M21.g_68_710

seq1  GAATTCCTGGCCTGATTTCCATCAGGGATGGACAGGGACATGGAAGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCCTGATTTCCATCAGGGATGGACAGGGACATGGAAGTTGT  50

seq1  AAGCTGACATAAATGCTTTCCCCCCCTCAACTTGCTTTTGTTGAAGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACATAAATGCTTTCCCCCCCTCAACTTGCTTTTGTTGAAGGTGT  100

seq1  TTAACACAGTTGCAATAGCAACTTCACTGTGCCCAGCACAGAATCTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACAGTTGCAATAGCAACTTCACTGTGCCCAGCACAGAATCTAGAA  150

seq1  TCTGGAATTGTCCAGAGAATTAAGCACCTGGCCTAGGTTCTGACAGCGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATTGTCCAGAGAATTAAGCACCTGGCCTAGGTTCTGACAGCGAT  200

seq1  CGATCACTGAAGCTCAGGAGGTGACTGCGGTGACCGTGACTCTTGATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCACTGAAGCTCAGGAGGTGACTGCGGTGACCGTGACTCTTGATCAA  250

seq1  TCTAGTGCCTGTCACCTAGCTGGCGATAGTGGTCAAGATAGTTGTCGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGCCTGTCACCTAGCTGGCGATAGTGGTCAAGATAGTTGTCGTAT  300

seq1  GTTACCAAGTGACTATCGATGGTGCATTTCCCACACAAGTAGTCTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAAGTGACTATCGATGGTGCATTTCCCACACAAGTAGTCTGTTTT  350

seq1  CAGGTATGGATCATTTTGCAGACAGAGAAGTAGGCTGTTAATGTTTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATGGATCATTTTGCAGACAGAGAAGTAGGCTGTTAATGTTTCCCT  400

seq1  ACTTAACTAATTTTTATTTTGTCATCATTTATTTTTTTAGTACACTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTAATTTTTATTTTGTCATCATTTATTTTTTTAGTACACTGACA  450

seq1  TGTTTCCCACAATTACTTTTAATTTATTGCATGTAATACTGGCTTTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCCACAATTACTTTTAATTTATTGCATGTAATACTGGCTTTCCAT  500

seq1  TTATAAAAATGAGTGTCTGAAATTGAAAAAATAATTAGTGCTTTTAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAATGAGTGTCTGAAATTGAAAAAATAATTAGTGCTTTTAAAGA  550

seq1  ACTTTAAAGAAGACACAGTGACGGAAATGGTCTGCTGATACAGTGTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAGAAGACACAGTGACGGAAATGGTCTGCTGATACAGTGTGAAC  600

seq1  CTTCAAATATAAAGCAGAACGGGCGGGAGTGGGGGAGGGGGTT  643
      ||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTCAAATATAAAGCAGAACGGGCGGGAGTGGGGGAGGGGGGT  643