BAC Information

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BAC

Clone NameB6Ng01-331A09
Chromosome8 (Build37)
Map Location 72,265,773 - 72,266,922
singlet/doubletsinglet
Overlap genenone
Upstream geneInts10, Lpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540, D10627, LOC665553, D130040H23Rik, LOC665561, LOC670593, EG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik
Downstream geneD330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26, Tmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell, Isyna1, Ssbp4, Lrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331A09.bB6Ng01-331A09.g
ACCGA117505GA117506
length1,0571,148
definitionB6Ng01-331A09.b B6Ng01-331A09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatagggttatttggttc
tctggagtctaacttcttgagttctttgtatatattggatattagccctc
tatcagatgtagggttggtaaagatcctttcccaatctgttggttgcctt
tttgccttattgacagtgtcatttgcttacagaagctttgcaattttatg
aggtcccatttgtcaattcttgatcttacagcacaagccattggtgttct
gttcaggaattttccccctgtgcccatatcttagaggctcttccccactt
cctcctctataagtttcagtgtttctggttttatgtggaggtccttgatc
cacctagatttgagctttgtataaggagataagaatgggtcaatttgcat
tcttctacatgctaaccaccagttgagccagcactatttgttaaaaatgc
tcgttttttatactggatggctttagcttctttgtcaaagatcaagtgac
catatgtgtatgggttcatttctgggtcttcaattccattccactgatct
tccagcctgtctctgtatcaataccatgcagtttttactactatttctct
gtaatacagcttgaggttggggatggtaattcccctagaagtttttttat
tgttgagaatcattttcgctattctgggtttttgttattccaaatgaatt
tgcaaattgttctttctaactctaggtagagttgagttggaattttgatg
gggattgcattgaatctgtaaattgctttcggcaagatggccatttttta
ctatattaattctgccagtccatgagcatgggagatctttccatcttctg
agatctacttcgatttcttttcttcagaaacttgaagttcttgtcatata
gatcattcacttgcttaggtagagtcacaccaatatatttttatagtgaa
ggggtgttgtttccctaaattcctgcctcagcctggttattctttggagt
aggaagaagggtcaatggattttgtttggagttaatttttatatccaggt
cactctc
gaattcatactggagtagaaaccctatgaatgtaaacaatgtgggaaagc
ctttagatttcctggtgccctgccattacatgaaaaaattcacactggag
aaaaaccctataagtgtaaacagtgtggaaaagcctttagatttcctggt
tccttgccattacatgaaaaaatacacactggagaaaaaccttatgagtg
taagcagtgtgggaaagcctttaggcgtcattatcatcttcagttacatg
aaaaaattcatactggagagaaaccctatgagtgtaaacagtgtgggaaa
gccttcaggcggcacagtcatcttcagagacatgaacggacccatggtgg
agagaaaccctttgaatgtgaataacatgctaaagcctttacacttctta
gttatcttctgttacgtgaaaaatttatactggagaaaaaaatgttgtca
gtgtaaacaatgttgggagaccttgcacttccatgacatcactcttatta
gatgcaaaccctatgaagtagacactgtgatgaagtctttagatgtgctt
gtcatcttcagtttcttagaaaatacaggagaaagctgtgtgactatgga
cattgtggtggagctcttaggtattacactggacagtgaccactcatgct
ggaaggaaaccctctggatggaaatagcgtggccaaaaggccacacctcg
cactgttctgttgtcgaaaggatttcaatcctaacccggagtttctaccc
cacctttgctattcccggatgaaagatacatacaacctttatatttatag
taagccttaagcaacacaagagctgggcagatactactctctatattgtt
ggaatctactttcctagctataagccagagttattgcttactacttactt
atgtttcatctgggctgttcttaactccaatcgggccagccctcaggcta
cattcttctgactcctaacccgtgcggcttctccttccttctcctgcacc
cttatttcttcctcatgtccctctctaatctaagcccaacaaaacccatg
ttctctttgtccaactgttactgtaacatctttattttacccataaaaat
attcttggagacaagtcacctctgtcgctcctggaacacaatcttaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_72265773_72266922
seq2: B6Ng01-331A09.g_68_1215 (reverse)

seq1  CTTAAGATTGGTTGTCTCAGAGACGACAGA-GTGACTTTGTCTCCAAGAT  49
      ||||||||||  |||  |||   ||||||| ||||| |||||||||||| 
seq2  CTTAAGATTG--TGTTCCAGGAGCGACAGAGGTGAC-TTGTCTCCAAGAA  47

seq1  ATTTTTTATTGGT-AAATAAAGATGTTAACAGTTAACAGTTGGACAAAAG  98
        ||||||| ||| ||||||||||||| |||| |||||||||||| ||||
seq2  TATTTTTATGGGTAAAATAAAGATGTT-ACAG-TAACAGTTGGAC-AAAG  94

seq1  AG-ACATTGGTTTTG-TGGGCTTAAGATTAGAGAGGGACCATGAGG-AGA  145
      || |||| ||||||| ||||||| |||||||||||||| ||||||| |||
seq2  AGAACATGGGTTTTGTTGGGCTT-AGATTAGAGAGGGA-CATGAGGAAGA  142

seq1  AATAAGGGTGCAGGAGAAGGAAGGAGAAGCCGCCACGGGTTAGGAGTCAG  195
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATAAGGGTGCAGGAGAAGGAAGGAGAAGCCG-CACGGGTTAGGAGTCAG  191

seq1  AAGAATGTAGCCCTGAGGGCTGG-CCGATTGGAGTTAAGAACAGCCCAGA  244
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  AAGAATGTAG-CCTGAGGGCTGGCCCGATTGGAGTTAAGAACAGCCCAGA  240

seq1  TGAAACAT-AGTAAGTAGTAAGCAATAACTCTGGCTTATAGCTAGGAAAG  293
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATAAGTAAGTAGTAAGCAATAACTCTGGCTTATAGCTAGGAAAG  290

seq1  TAGATTCCAACAATATAGAGAGTAGTATCTGCCCAGCTCTTGTGTTGCTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCCAACAATATAGAGAGTAGTATCTGCCCAGCTCTTGTGTTGCTT  340

seq1  AAGGCTTACTATAAATATAAAGGTTGTATGTATCTTTCATCCGGGAATAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTACTATAAATATAAAGGTTGTATGTATCTTTCATCCGGGAATAG  390

seq1  CAAAGGTGGGGTAGAAACTCCGGGTTAGGATTGAAATCCTTTCGACAACA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGGGGTAGAAACTCCGGGTTAGGATTGAAATCCTTTCGACAACA  440

seq1  GAACAGTGCGAGGTGTGGCCTTTTGGCCACGCTATTTCCATCCAGAGGGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTGCGAGGTGTGGCCTTTTGGCCACGCTATTTCCATCCAGAGGGT  490

seq1  TTCCTTCCAGCATGAGTGGTCACTGTCCAGTGTAATACCTAAGAGCTCCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCAGCATGAGTGGTCACTGTCCAGTGTAATACCTAAGAGCTCCA  540

seq1  CCACAATGTCCATAGTCACACAGCTTTCTCCTGTATTTTCTAAGAAACTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGTCCATAGTCACACAGCTTTCTCCTGTATTTTCTAAGAAACTG  590

seq1  AAGATGACAAGCACATCTAAAGACTTCATCACAGTGTCTACTTCATAGGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACAAGCACATCTAAAGACTTCATCACAGTGTCTACTTCATAGGG  640

seq1  TTTGCATCTAATAAGAGTGATGTCATGGAAGTGCAAGGTCTCCCAACATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATCTAATAAGAGTGATGTCATGGAAGTGCAAGGTCTCCCAACATT  690

seq1  GTTTACACTGACAACATTTTTTTCTCCAGTATAAATTTTTCACGTAACAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACACTGACAACATTTTTTTCTCCAGTATAAATTTTTCACGTAACAG  740

seq1  AAGATAACTAAGAAGTGTAAAGGCTTTAGCATGTTATTCACATTCAAAGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAACTAAGAAGTGTAAAGGCTTTAGCATGTTATTCACATTCAAAGG  790

seq1  GTTTCTCTCCACCATGGGTCCGTTCATGTCTCTGAAGATGACTGTGCCGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCCACCATGGGTCCGTTCATGTCTCTGAAGATGACTGTGCCGC  840

seq1  CTGAAGGCTTTCCCACACTGTTTACACTCATAGGGTTTCTCTCCAGTATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGCTTTCCCACACTGTTTACACTCATAGGGTTTCTCTCCAGTATG  890

seq1  AATTTTTTCATGTAACTGAAGATGATAATGACGCCTAAAGGCTTTCCCAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTCATGTAACTGAAGATGATAATGACGCCTAAAGGCTTTCCCAC  940

seq1  ACTGCTTACACTCATAAGGTTTTTCTCCAGTGTGTATTTTTTCATGTAAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTACACTCATAAGGTTTTTCTCCAGTGTGTATTTTTTCATGTAAT  990

seq1  GGCAAGGAACCAGGAAATCTAAAGGCTTTTCCACACTGTTTACACTTATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGAACCAGGAAATCTAAAGGCTTTTCCACACTGTTTACACTTATA  1040

seq1  GGGTTTTTCTCCAGTGTGAATTTTTTCATGTAATGGCAGGGCACCAGGAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTTCTCCAGTGTGAATTTTTTCATGTAATGGCAGGGCACCAGGAA  1090

seq1  ATCTAAAGGCTTTCCCACATTGTTTACATTCATAGGGTTTCT-CTCCAGT  1142
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCTAAAGGCTTTCCCACATTGTTTACATTCATAGGGTTTCTACTCCAGT  1140

seq1  ATGAATTC  1150
      ||||||||
seq2  ATGAATTC  1148