BAC Information

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BAC

Clone NameB6Ng01-332B03
Chromosome8 (Build37)
Map Location 129,014,814 - 129,014,954
singlet/doubletsinglet
Overlap genenone
Upstream geneSipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653
Downstream geneIrf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332B03.bB6Ng01-332B03.g
ACCGA118276GA118277
length1,188431
definitionB6Ng01-332B03.b B6Ng01-332B03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttgatg
ggattgcaggcttgtacaaccactctggaaatcaatctggtggttcctca
gaaaagtggacatagtactaccagaggatcccgcaacacctctcctggcc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatttctaggcaa
atggatgaacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactctcacaatatgtactcactgataagtggatattagcccagaagc
ttaggatacccaagatttaagatacaatttgctaaacgcatgaaactcaa
gaagaatgaagaccaaaattgtggacacttagccccttcttagaaatagg
aacaaaacacccatggaaggagttacagagacaaaatttggagctgtgac
gaaaggatggaccatctagtgattgccatatccagggatccatctcatag
tcagcctccaaacgctgacaccattgcatacactagcaagattttatcga
acggacccagatgtagctgtctcttgtgagaatatgccagggcctagcaa
acacaggaagtggatgctcacagtcagctattgggatggatcacagggcc
cccatggaggagctagagaaagtacccatggaagctaaagggatctgcaa
cctatatgtggacaacattatgaactaaccagtacccagagctctgactc
ttagctgcatatatatcaaaagatggcctagtgggcatcactggaaagga
gaggcccattggaacttgcaaactgtatatggcccagtacaggggaatgt
caggtcaaaagaatgggaattggggtggtatggagtag
tctgtttggatcccaagcacaatttgtttttctttaccttttattggata
ttctctctctctctctctctctctctctctctctctctctctctctctct
ctctattgagggtgagagagtgtgtgtgcgagagaagtctctccgaagta
tatgccccattcaaactatatatatgtctgtctgtctctaactctctctc
tctctctctctctctctctctaactctctgttgctgttttgtctctgtct
gactcagtctctctctctctgtctctctctctctctctctctctctctct
ccctctccaaatctctgagtgtggataaaggggtgtctatcaatctacct
aaaaccctctcccgcggtatttttatcgcatttctgagtctatataacta
aataggggtatctctctttctctctctcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129014814_129014954
seq2: B6Ng01-332B03.g_121_503 (reverse)

seq1  --AAAGAGAGAGAAAGAGTG-------TGTTTATGGGTACAT--------  33
        | |||||||||||||| |       | ||||  | || ||        
seq2  AAAGAGAGAGAGAAAGAGAGATACCCCTATTTA--GTTATATAGACTCAG  48

seq1  --GTGTAACAGATATATCTGGGTACAAG--TGTGTGTA---TGAAAG---  73
         ||  | | | ||| |  || | | |  | |  |||   ||| ||   
seq2  AAATGCGATAAAAATACCGCGGGAGAGGGTTTTAGGTAGATTGATAGACA  98

seq1  -----------------AGAGAGGAGGAGAGGGAGAGAGAGAGAGAGAGA  106
                       |||||   |||||||||||||||||||||||||
seq2  CCCCTTTATCCACACTCAGAGATTTGGAGAGGGAGAGAGAGAGAGAGAGA  148

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG-AATA--------------  141
      |||||||||||| |||||||||||||  |||  | |              
seq2  GAGAGAGAGAGACAGAGAGAGAGAGACTGAGTCAGACAGAGACAAAACAG  198

seq1  --------------------------------------------------  141
                                                        
seq2  CAACAGAGAGTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAGAGAC  248

seq1  --------------------------------------------------  141
                                                        
seq2  AGACAGACATATATATAGTTTGAATGGGGCATATACTTCGGAGAGACTTC  298

seq1  --------------------------------------------------  141
                                                        
seq2  TCTCGCACACACACTCTCTCACCCTCAATAGAGAGAGAGAGAGAGAGAGA  348

seq1  -----------------------------------  141
                                         
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATA  383