BAC Information

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BAC

Clone NameB6Ng01-332L16
Chromosome8 (Build37)
Map Location 64,260,263 - 64,406,263
singlet/doubletdoublet
Overlap genePalld
Upstream gene2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, LOC100040872
Downstream geneBC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332L16.bB6Ng01-332L16.g
ACCGA118746GA118747
length1,1191,015
definitionB6Ng01-332L16.b B6Ng01-332L16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,260,263 - 64,261,377)(64,405,706 - 64,406,263)
sequence
gaattcttagatgttttaagaaaccattgtgtagtggattggtctggtgt
ttgctaaatactgtgatcctcacgtataccagcttttgtgtgcaaactct
ttgcttcccgagttatcactaattcgttaataaagatgcctatggcctgg
acagggcagaagaaagtgggcggagtgaaggttcccaggtctggggtctc
agagacctggcagagcaaggaggcgagagagaaggaaagaagttgccatg
ggataggtgaattgtgagctcatggccatgaggtggaataagagcggagc
aggatacacatggcaagtgataactcgggcttattgactgggaagtagac
aaactagtatagagggttgatatctgcccaactcaaatgctttaaggctt
attataaatgtacatttttttctgtcttttatttgagaactaaatgttct
caggtggggtagaaagtcctgaataatatttactgcaatagcagtattta
catttttatatttcaggaactttggaggaagcatcatctagcattggtaa
tgcaaattcagccttctaaaggctgacactgcagaatatcatgaaagctc
caataatcctggagtcaaaaagccatctcgagatgcagatgtagtgtcta
tgaataagtagtggcttgctgtgggcatgcttcaggtatgtgcctgtcca
agactgaaaacctttaagttataaagcaagaacagtcagccctctatacc
cttgaatctcatatgaccagagtcaaccaactgaagaccaaacatatttg
aaaagtgattctatctgttctgaatatattgcagagccttttttcttgtc
atagttccctaagtactatagtgaaccagcaatttacacagcatttatat
tgtgttagggtctttaagaaatctacagggtggttacttagtcacccata
tagcccatagaatgagctgtacatgctcaaagagaatctgtgaatgtggc
ccacacatatataagtgtcaaaggttcaagaatagtcttgtaagtatcca
gcatttatgtgttagtctatgaaactctaacatttttatgtttgagaact
gacaattcttgtaggtttc
gaattctagaaagtgggggactcttgcatttgggtgaccgtgacaacaat
gggaccaaaagctattttgtcaggcactggcagaactctcatccatgggg
aaagagcaacagaatgcaatgtgttgagataacttgagaaacatccattg
ttttgaaggccattaagaatggacccttccctcatggtcagcttttgacc
tagcccctgtttccttggtaacagtaagaaaaggtcccaccctttctgtc
ctcctttacattaaaatactacctgaaaaggtagaggtgtctgggctttg
ttgaggctttgtcctcctgggtgagaaaatgtcaccctttcctgttccct
ccaatttaagtcagcgacctaattccttgagactgtggtaactgtggtaa
tagatactgcacgcatagcctaaaccaaggagcatgatataagtggatta
tctcaggtgggcccaaaataatcataagcaggttcttaatgtggtgacag
aggcagaaattcaggctggtaatttgattacatatgtagtcttctagcaa
gactctatgaagatgatggaaaaccacaaaccaaggaatgaaattgaaat
aatctactccaggttacaaatctccatgcttattaagccaactgtgagca
ctgtgagttctttacacagccagctgaccaagagtaagctggcacctcag
gagagctctcggtggagaaaacagggttttcaagtcaaaagtctacaatt
atagcacacagggggtaggctgaggacatgtcacatcaggatatatatat
atataatttactggagcaaggacaactctgtggccaccattgagggatat
gtctccctcactgttaatgtttactggtcctcaggagagctcatgagctc
ccctcatcagtgatggaacgttgatgagccttgtcttgtgttgatagtca
ctgttactatgaattcacaggtataacaggcatgtcgtgtcagagagagt
gtttcacagcactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_64260263_64261377
seq2: B6Ng01-332L16.b_46_1164

seq1  GAATTCTTAGATGTTTTAAGAAACCATTGTGTAGTGGATTGGTCTGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGATGTTTTAAGAAACCATTGTGTAGTGGATTGGTCTGGTGT  50

seq1  TTGCTAAATACTGTGATCCTCACGTATACCAGCTTTTGTGTGCAAACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAATACTGTGATCCTCACGTATACCAGCTTTTGTGTGCAAACTCT  100

seq1  TTGCTTCCCGAGTTATCACTAATTCGTTAATAAAGATGCCTATGGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCCGAGTTATCACTAATTCGTTAATAAAGATGCCTATGGCCTGG  150

seq1  ACAGGGCAGAAGAAAGTGGGCGGAGTGAAGGTTCCCAGGTCTGGGGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCAGAAGAAAGTGGGCGGAGTGAAGGTTCCCAGGTCTGGGGTCTC  200

seq1  AGAGACCTGGCAGAGCAAGGAGGCGAGAGAGAAGGAAAGAAGTTGCCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCTGGCAGAGCAAGGAGGCGAGAGAGAAGGAAAGAAGTTGCCATG  250

seq1  GGATAGGTGAATTGTGAGCTCATGGCCATGAGGTGGAATAAGAGCGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGTGAATTGTGAGCTCATGGCCATGAGGTGGAATAAGAGCGGAGC  300

seq1  AGGATACACATGGCAAGTGATAACTCGGGCTTATTGACTGGGAAGTAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACACATGGCAAGTGATAACTCGGGCTTATTGACTGGGAAGTAGAC  350

seq1  AAACTAGTATAGAGGGTTGATATCTGCCCAACTCAAATGCTTTAAGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGTATAGAGGGTTGATATCTGCCCAACTCAAATGCTTTAAGGCTT  400

seq1  ATTATAAATGTACATTTTTTTCTGTCTTTTATTTGAGAACTAAATGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAATGTACATTTTTTTCTGTCTTTTATTTGAGAACTAAATGTTCT  450

seq1  CAGGTGGGGTAGAAAGTCCTGAATAATATTTACTGCAATAGCAGTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGGGTAGAAAGTCCTGAATAATATTTACTGCAATAGCAGTATTTA  500

seq1  CATTTTTATATTTCAGGAACTTTGGAGGAAGCATCATCTAGCATTGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATATTTCAGGAACTTTGGAGGAAGCATCATCTAGCATTGGTAA  550

seq1  TGCAAATTCAGCCTTCTAAAGGCTGACACTGCAGAATATCATGAAAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTCAGCCTTCTAAAGGCTGACACTGCAGAATATCATGAAAGCTC  600

seq1  CAATAATCCTGGAGTCAAAAAGCCATCTCGAGATGCAGATGTAGTGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATCCTGGAGTCAAAAAGCCATCTCGAGATGCAGATGTAGTGTCTA  650

seq1  TGAATAAGTAGTGGCTTGCTGTGGGCATGCTTCAGGTATGTGCCTGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGTAGTGGCTTGCTGTGGGCATGCTTCAGGTATGTGCCTGTCCA  700

seq1  AGACTGAAAACCTTTAAGTTATAAAGCAAGAACAGTCAGCCCTCTATACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAAAACCTTTAAGTTATAAAGCAAGAACAGTCAGCCCTCTATACC  750

seq1  CTTGAATCTCATATGACCAGAGTCAACCAACTGAAGACCAAACATATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATCTCATATGACCAGAGTCAACCAACTGAAGACCAAACATATTTG  800

seq1  AAAAGTGATTCTATCTGTTCTGAATATATTGCAGAGCCTTTTTTCTTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGATTCTATCTGTTCTGAATATATTGCAGAGCCTTTTTTCTTGTC  850

seq1  ATAGTTCCCTAAGTACTATAGTGAACCAGCAATTTACACAGCATTTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCCCTAAGTACTATAGTGAACCAGCAATTTACACAGCATTTATAT  900

seq1  TGTGTTAGGGTCTTTAAGAAATCTACAGGGTGGTTACTTAGTCACCCATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGGGTCTTTAAGAAATCTACAGGGTGGTTACTTAGTCACCCATA  950

seq1  TAGCCCATAGAATGAGCTGTACATGCTCAAAGAG-ATCTGTGAATGTGGC  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAGCCCATAGAATGAGCTGTACATGCTCAAAGAGAATCTGTGAATGTGGC  1000

seq1  CCAACACATATATAAGTGTCAAAGGTTCA--GATAGTCTTGTAAGTATCC  1047
      || ||||||||||||||||||||||||||   ||||||||||||||||||
seq2  CC-ACACATATATAAGTGTCAAAGGTTCAAGAATAGTCTTGTAAGTATCC  1049

seq1  AGCATTTATGTGTAAGTTCTATGGAAACTCT-ACA-TTTTATGTTTGAGA  1095
      ||||||||||||| || ||||| |||||||| ||| ||||||||||||||
seq2  AGCATTTATGTGTTAG-TCTAT-GAAACTCTAACATTTTTATGTTTGAGA  1097

seq1  CCTGACA--TC-TGTAGGGTTTC  1115
       ||||||  || |||| ||||||
seq2  ACTGACAATTCTTGTA-GGTTTC  1119

seq1: chr8_64405706_64406263
seq2: B6Ng01-332L16.g_68_625 (reverse)

seq1  ATAGAGTCTTGCTAGAAGACTACATATGTAATCAAATTACCAGCCTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTCTTGCTAGAAGACTACATATGTAATCAAATTACCAGCCTGAAT  50

seq1  TTCTGCCTCTGTCACCACATTAAGAACCTGCTTATGATTATTTTGGGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTCTGTCACCACATTAAGAACCTGCTTATGATTATTTTGGGCCC  100

seq1  ACCTGAGATAATCCACTTATATCATGCTCCTTGGTTTAGGCTATGCGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGATAATCCACTTATATCATGCTCCTTGGTTTAGGCTATGCGTGC  150

seq1  AGTATCTATTACCACAGTTACCACAGTCTCAAGGAATTAGGTCGCTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTATTACCACAGTTACCACAGTCTCAAGGAATTAGGTCGCTGACT  200

seq1  TAAATTGGAGGGAACAGGAAAGGGTGACATTTTCTCACCCAGGAGGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGAGGGAACAGGAAAGGGTGACATTTTCTCACCCAGGAGGACAA  250

seq1  AGCCTCAACAAAGCCCAGACACCTCTACCTTTTCAGGTAGTATTTTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAACAAAGCCCAGACACCTCTACCTTTTCAGGTAGTATTTTAATG  300

seq1  TAAAGGAGGACAGAAAGGGTGGGACCTTTTCTTACTGTTACCAAGGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAGGACAGAAAGGGTGGGACCTTTTCTTACTGTTACCAAGGAAAC  350

seq1  AGGGGCTAGGTCAAAAGCTGACCATGAGGGAAGGGTCCATTCTTAATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTAGGTCAAAAGCTGACCATGAGGGAAGGGTCCATTCTTAATGGC  400

seq1  CTTCAAAACAATGGATGTTTCTCAAGTTATCTCAACACATTGCATTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAACAATGGATGTTTCTCAAGTTATCTCAACACATTGCATTCTGT  450

seq1  TGCTCTTTCCCCATGGATGAGAGTTCTGCCAGTGCCTGACAAAATAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTCCCCATGGATGAGAGTTCTGCCAGTGCCTGACAAAATAGCTT  500

seq1  TTGGTCCCATTGTTGTCACGGTCACCCAAATGCAAGAGTCCCCCACTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCCATTGTTGTCACGGTCACCCAAATGCAAGAGTCCCCCACTTTC  550

seq1  TAGAATTC  558
      ||||||||
seq2  TAGAATTC  558