BAC Information

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BAC

Clone NameB6Ng01-332O04
Chromosome8 (Build37)
Map Location 59,419,215 - 59,420,303
singlet/doubletsinglet
Overlap genenone
Upstream geneGlra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332O04.bB6Ng01-332O04.g
ACCGA118858GA118859
length1,1671,090
definitionB6Ng01-332O04.b B6Ng01-332O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaagggatcttcaaccta
taggtggaacacattatgactaaccagtacccctgagctctgactctagc
tgcatatgttatcaaagatgactagtcgcatcactggaaagaggaggccc
atggaaacgcagactttgtggtgccagaacaggggcacgcaaggcaaaag
tgagattggttggttag
gaattccagattaaacttcatttttaatgtttcaaatcaaagaatgaaac
ttcttaagggatttacaacatttactagatgaagtgtgttcattttctgc
tgataggatgggggaggaacaaatgagcccctacctgtaactgaagcact
actaacagttgatagttgttaacagatgaagaatcaggttttttaaaatc
ttcattttaaggatagagtccccggtagattgaccatgctctaggggatg
catatatagatggcaataattggatttagtggattatgaataagcaaatt
aaaacaaaatcgaggacataatgttagaaaactaatggagtcttcaagga
ataatcaaaggggaagtgggatacacatgataaaaaatgtatatgcatgt
atgaaattctcagaataaatcttaaatgttatttaaaaaataactatcta
actcaaacctcagttaacttatgagatagaacatagtctcaaaaatattt
tctgttttgaattttattatttaacaatggcatgtgcctagtattatgtt
atgaagaagttttagagatatgtgagtgtcaccatagacatgcttcacac
aaaaagaccattgcaggagggccacacttacagggatttgggccattgac
tctagacacatgtatctcaatataacattctttcttaccaacaaatgata
agatagaattccaatcaaaccagcataagccatcatatatagttcagaag
aaatactgaaagtcacgtcattttatgaccagatgaagaaagataaatat
ttaattaaaaagtctcatttgttggcttttcttggaggaaaaattgaatt
ttttaaataaagttttagaactgttctaagcactctagaactttccttgt
attgcctatactagttagtctaaatttcatttaaaacctcatgtttcaaa
caatgatactgaaggccatgtctacagaaaaccaggtcagttacctgcat
attgttgtcttctctgcctctgttcttcagctaatccctcagtcttgtcc
ctgtttccctagctctggaattagagcaccaactgaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59419215_59420303
seq2: B6Ng01-332O04.g_67_1156

seq1  GAATTCCAGATTAAACTTCATTTTTAATGTTTCAAATCAAAGAATGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTAAACTTCATTTTTAATGTTTCAAATCAAAGAATGAAAC  50

seq1  TTCTTAAGGGATTTACAACATTTACTAGATGAAGTGTGTTCATTTTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGGGATTTACAACATTTACTAGATGAAGTGTGTTCATTTTCTGC  100

seq1  TGATAGGATGGGGGAGGAACAAATGAGCCCCTACCTGTAACTGAAGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGATGGGGGAGGAACAAATGAGCCCCTACCTGTAACTGAAGCACT  150

seq1  ACTAACAGTTGATAGTTGTTAACAGATGAAGAATCAGGTTTTTTAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGTTGATAGTTGTTAACAGATGAAGAATCAGGTTTTTTAAAATC  200

seq1  TTCATTTTAAGGATAGAGTCCCCGGTAGATTGACCATGCTCTAGGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTAAGGATAGAGTCCCCGGTAGATTGACCATGCTCTAGGGGATG  250

seq1  CATATATAGATGGCAATAATTGGATTTAGTGGATTATGAATAAGCAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAGATGGCAATAATTGGATTTAGTGGATTATGAATAAGCAAATT  300

seq1  AAAACAAAATCGAGGACATAATGTTAGAAAACTAATGGAGTCTTCAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATCGAGGACATAATGTTAGAAAACTAATGGAGTCTTCAAGGA  350

seq1  ATAATCAAAGGGGAAGTGGGATACACATGATAAAAAATGTATATGCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAAGGGGAAGTGGGATACACATGATAAAAAATGTATATGCATGT  400

seq1  ATGAAATTCTCAGAATAAATCTTAAATGTTATTTAAAAAATAACTATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCTCAGAATAAATCTTAAATGTTATTTAAAAAATAACTATCTA  450

seq1  ACTCAAACCTCAGTTAACTTATGAGATAGAACATAGTCTCAAAAATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAACCTCAGTTAACTTATGAGATAGAACATAGTCTCAAAAATATTT  500

seq1  TCTGTTTTGAATTTTATTATTTAACAATGGCATGTGCCTAGTATTATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTGAATTTTATTATTTAACAATGGCATGTGCCTAGTATTATGTT  550

seq1  ATGAAGAAGTTTTAGAGATATGTGAGTGTCACCATAGACATGCTTCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAGTTTTAGAGATATGTGAGTGTCACCATAGACATGCTTCACAC  600

seq1  AAAAAGACCATTGCAGGAGGGCCACACTTACAGGGATTTGGGCCATTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACCATTGCAGGAGGGCCACACTTACAGGGATTTGGGCCATTGAC  650

seq1  TCTAGACACATGTATCTCAATATAACATTCTTTCTTACCAACAAATGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACACATGTATCTCAATATAACATTCTTTCTTACCAACAAATGATA  700

seq1  AGATAGAATTCCAATCAAACCAGCATAAGCCATCATATATAGTTCAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAATTCCAATCAAACCAGCATAAGCCATCATATATAGTTCAGAAG  750

seq1  AAATACTG-AAGTCACGTCATTTTATGACCAGATGAAGAAAGATAAATAT  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGAAAGTCACGTCATTTTATGACCAGATGAAGAAAGATAAATAT  800

seq1  TTAATTAAAAAGTCTCATTTGTTGGCTTTTCTTGGAGGAAAAATTGAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAAAAGTCTCATTTGTTGGCTTTTCTTGGAGGAAAAATTGAATT  850

seq1  TTTTAAATAAGGTTTTAGAACTGTTCTAAGCACTCTAGAACTTTCCTTGT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAAAGTTTTAGAACTGTTCTAAGCACTCTAGAACTTTCCTTGT  900

seq1  ATTGCCTATACTAGTTAGTCTAAATTTCATTTAAAACCTCATGTTTCAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTATACTAGTTAGTCTAAATTTCATTTAAAACCTCATGTTTCAAA  950

seq1  CAATGATACTG-AGGCCATGTCTACCAGAAAACCAGGTCAGTTACCTGCA  998
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  CAATGATACTGAAGGCCATGTCTA-CAGAAAACCAGGTCAGTTACCTGCA  999

seq1  TA-TGTTGTCTTCTCTGCCTCTGTTCCTCAGGCCTAATCACTCAGTCTTG  1047
      || ||||||||||||||||||||||| ||||  |||||| ||||||||||
seq2  TATTGTTGTCTTCTCTGCCTCTGTTCTTCAG--CTAATCCCTCAGTCTTG  1047

seq1  TCCCTGGTTCCCTAGCTCTGGAA-TAGAGCACCAACTGGAGTT  1089
      |||||| |||||||||||||||| |||||||||||||| ||||
seq2  TCCCTGTTTCCCTAGCTCTGGAATTAGAGCACCAACTGAAGTT  1090