BAC Information

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BAC

Clone NameB6Ng01-337A08
Chromosome8 (Build37)
Map Location 117,625,904 - 117,627,048
singlet/doubletsinglet
Overlap geneWwox
Upstream geneNudt7, AI427515, Clec3a
Downstream geneMaf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337A08.b
ACCGA121773
length1,151
definitionB6Ng01-337A08.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgacaacagtccagcggttattgtttgcagcaaatgactgcagc
agattaaccacaagttaagaacaagtcagggctactctttgagtcaggta
cggctggggtctgcttcccatccatcagtgtcaggatcacgtgcaatccc
agatctctgtaactctcaaagtattgcagggtgccgcatgctaaatggag
gccgagaggaaaggcattctgcttgcagctcaatcttgtaaggattcttt
caaaagcatattaatccattagtaatccattttgatttaaaaataatggt
catatatatttggtacaatatgtactcaacccggtcctggaaaatgatat
ggaatcacaagtttaaaccctaggaactccacagcaggcttgttgaaatc
tcctctactactatttttgttaaaaaaatagtaattgctatatcaagtat
ctatcaagagggaatctgtgagtcaggtatggcacacaccagtaatccca
gcactcaggaggtggatgcagggtaggcatgagtttcaggctggtctggg
cttctttgaagatcctgtgttaacatggaaaattaaagaaaagatcagta
gagaaggtccgtggtgtctctgagggcagagagggaggcgcaggcaggag
agagaacttttcatttaacaacatttcaaatttagtacacagttaccaga
ataatactctgatttactgatgtgcccgtgttttcaattatactgatttg
atgcacataagaagacatattatcagtaagatatttgagtgtatggtttc
tgccattatgcaaattaaatggaaggttctaaacatacatttttatttta
ggctttataatataccccgcactctgttatctatgatttaagtcccagag
gtgtcttctggtctttgcgatggttcagtgggtaaagtgcctacacgcat
gaggacctggttcaaatccccagggattcacacaaaatctggaaacaggt
ggagtgagatggcgcagagggtaaaagtgcgtgtctgaagcctataaata
ggcctcaccttccatcttccagagctcccattaagagaagagaaagtgat
tcccagaaaggttctatgacctcccacaaggccaaggtgaaacacacaca
c
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117625904_117627048
seq2: B6Ng01-337A08.b_45_1195

seq1  GAATTCTGACAACAGTCCAGCGGTTATTGTTTGCAGCAAATGACTGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACAACAGTCCAGCGGTTATTGTTTGCAGCAAATGACTGCAGC  50

seq1  AGATTAACCACAAGTTAAGAACAAGTCAGGGCTACTCTTTGAGTCAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAACCACAAGTTAAGAACAAGTCAGGGCTACTCTTTGAGTCAGGTA  100

seq1  CGGCTGGGGTCTGCTTCCCATCCATCAGTGTCAGGATCACGTGCAATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGGGGTCTGCTTCCCATCCATCAGTGTCAGGATCACGTGCAATCCC  150

seq1  AGATCTCTGTAACTCTCAAAGTATTGCAGGGTGCCGCATGCTAAATGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTGTAACTCTCAAAGTATTGCAGGGTGCCGCATGCTAAATGGAG  200

seq1  GCCGAGAGGAAAGGCATTCTGCTTGCAGCTCAATCTTGTAAGGATTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGAGGAAAGGCATTCTGCTTGCAGCTCAATCTTGTAAGGATTCTTT  250

seq1  CAAAAGCATATTAATCCATTAGTAATCCATTTTGATTTAAAAATAATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCATATTAATCCATTAGTAATCCATTTTGATTTAAAAATAATGGT  300

seq1  CATATATATTTGGTACAATATGTACTCAACCCGGTCCTGGAAAATGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATTTGGTACAATATGTACTCAACCCGGTCCTGGAAAATGATAT  350

seq1  GGAATCACAAGTTTAAACCCTAGGAACTCCACAGCAGGCTTGTTGAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCACAAGTTTAAACCCTAGGAACTCCACAGCAGGCTTGTTGAAATC  400

seq1  TCCTCTACTACTATTTTTGTTAAAAAAATAGTAATTGCTATATCAAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTACTACTATTTTTGTTAAAAAAATAGTAATTGCTATATCAAGTAT  450

seq1  CTATCAAGAGGGAATCTGTGAGTCAGGTATGGCACACACCAGTAATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAGAGGGAATCTGTGAGTCAGGTATGGCACACACCAGTAATCCCA  500

seq1  GCACTCAGGAGGTGGATGCAGGGTAGGCATGAGTTTCAGGCTGGTCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAGGAGGTGGATGCAGGGTAGGCATGAGTTTCAGGCTGGTCTGGG  550

seq1  CTTCTTTGAAGATCCTGTGTTAACATGGAAAATTAAAGAAAAGATCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGAAGATCCTGTGTTAACATGGAAAATTAAAGAAAAGATCAGTA  600

seq1  GAGAAGGTCCGTGGTGTCTCTGAGGGCAGAGAGGGAGGCGCAGGCAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTCCGTGGTGTCTCTGAGGGCAGAGAGGGAGGCGCAGGCAGGAG  650

seq1  AGAGAACTTTTCATTTAACAACATTTCAAATTTAGTACACAGTTACCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTTTTCATTTAACAACATTTCAAATTTAGTACACAGTTACCAGA  700

seq1  ATAATACTCTGATTTACTGATGTGCCCGTGTTTTCAATTATACTGATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTCTGATTTACTGATGTGCCCGTGTTTTCAATTATACTGATTTG  750

seq1  ATGCACATAAGAAGACATATTATCAGTAAGATATTTGAGTGTATGGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATAAGAAGACATATTATCAGTAAGATATTTGAGTGTATGGTTTC  800

seq1  TGCCATTATGCAAATTAAATGGAAGGTTCTAAACATACATTTTTATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTATGCAAATTAAATGGAAGGTTCTAAACATACATTTTTATTTTA  850

seq1  GGCTTTATAATATACCCCGCACTCTGTTATCTATGATTTAAGTCCCAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTATAATATACCCCGCACTCTGTTATCTATGATTTAAGTCCCAGAG  900

seq1  GTGTCTTCTGGTCTTTGCGATGGTTCAGTGGGTAAAGTGCCTACACGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTCTGGTCTTTGCGATGGTTCAGTGGGTAAAGTGCCTACACGCAT  950

seq1  GAGGACCTGGGTTCAAATCCCCAGGGATCCACACAAAATCTGGAAACAGG  1000
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  GAGGACCT-GGTTCAAATCCCCAGGGATTCACACAAAATCTGGAAACAGG  999

seq1  TGGAGTGAGATGGCGCAGAGGGTAAAAGTGCGTGTCTGAAAGCCTAATAA  1050
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  TGGAGTGAGATGGCGCAGAGGGTAAAAGTGCGTGTCTG-AAGCCT-ATAA  1047

seq1  ATA-GCCTCA-CTTCCATC-TCCAGAGCTCCCATT-AGAG-AGAG-AAGT  1094
      ||| |||||| |||||||| ||||||||||||||| |||| |||| ||||
seq2  ATAGGCCTCACCTTCCATCTTCCAGAGCTCCCATTAAGAGAAGAGAAAGT  1097

seq1  GATT-CCAGAAA-GTTCTATGACCT-CCACAAGCACAGTGTAGAACACAC  1141
      |||| ||||||| |||||||||||| |||||||  ||  ||  |||||||
seq2  GATTCCCAGAAAGGTTCTATGACCTCCCACAAGGCCAAGGTGAAACACAC  1147

seq1  ACAC  1145
      ||||
seq2  ACAC  1151


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