BAC Information

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BAC

Clone NameB6Ng01-338C04
Chromosome8 (Build37)
Map Location 4,433,378 - 4,434,113
singlet/doubletsinglet
Overlap genenone
Upstream geneArhgef18, Pex11c, 1700019B03Rik, Zfp358, Mcoln1, Pnpla6, C330021F23Rik, 2310057J16Rik, Xab2, Pcp2, Stxbp2, Retn, 1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977
Downstream genePpia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338C04.bB6Ng01-338C04.g
ACCGA122530GA122531
length1,2191,008
definitionB6Ng01-338C04.b B6Ng01-338C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgatcttagtgcctgagttattggtgttctgttcaggaagttg
tatcttgtgccacttctcttgtattagatttggtataactggatttatgt
tgaggtccttgactcacttgggcttaagttctgtgcaggatgatcaatac
agatctaattgaattcttctacatgcagatattcaattagtccaacaaca
tttgttaaagatgctttcttttttccttagtatagttttgccttttttgt
tgataaaatcaagtgtattacaggtgtatggcttatttctggatcttcaa
ttctattacactggtcaaactttctgtttatatgccaataacatttggtt
tttattactgtttctttgtaatacagcttgaaatcagacatggtgatacc
tctagttcttttattgtacaggattgttttaactatcttgggtttttgtt
ttttccatatgaagttgaatattggtattttactgtctttaaagaattgt
gttgtaattttgatgcaaatttcattaatttgtacattacttttggttag
atagccatttttactatgttaattctaccaatgcatgagcatggaagatc
tttacatcttttgatatcttcctcaatttctttctttaagacttgaagtt
cttgtgatatagattttttcacttgcttggttacaattacacgaagatat
tttatattatttgtggctattgtgaagggtattagtttcctaatttcttt
ctcagctcatttattgtttgtataaatgagggtattgattttgttagatt
ttttgtttgtttgtttgtttgtttttagccacttggctaaaagtgtttat
cagctgtaggagtttcccagtaaattttttgagccatttatgtacactat
catattatatgcgaatagcaatactttgaccacttccttcccaattttta
tccttttgatatcttttagttgtcttattctctagctaaaacttcaagtg
ctacattaaatagatacagaaagagtgtacagctgtcatgtccctgattt
tagttatcactttaagttctttcactatttttatatttgccttttagcta
ctataattgcttcattatgtttgcaacactttgtattctctagctctcag
actttaactgaggaatttatagacatactttttgccacactcacttttta
ttagggttttgaaacctct
gaattccagggagggttaggtgacctttatgttgattggttaactcagtc
tctaagtgtatgggtatctttgtgtttggctagggctctgaggacattcc
agaaccattgctgggggtgcccagagactgttttgggttgggggttggaa
actgttgctgacttactgcttttgcctcaggccaggaggttgggcagctt
ctgattggctgccttggcctgtgtttgtttccagtagctgatttgtggag
acttgcccagttctgggaaacagaaacttaggcccagtttcctgaactgc
caatttgaagcctgtcacggagtcagtttgactaatcctctcacctgctt
tcttgtagaaagcagttcaggcatggcactacccacagtgggttgggccc
tcccccattaatcactaattggaaaaacatattatcgctggatttcatgg
aggcatttgctcaactgaggctcctttccctctgactactccagcttata
ttgacacacaaaacagccagtacaattggattaacagtttataatgaagg
gaggccaggccattagtttaaggaagaaacctggaaacaggagctgaagc
agagatcagggaggagcactgcttactggtttgatcaattaagaaaatgc
cccaaagtcttgcctatgggcaatttaatgggggtcatttttctcatagg
aggttctctcttcccagatgactctagcttgtatcaagctgacaaagaca
cttaccagaacagctacaaaaagaagaaaacaaaaccacccccctatgtc
agaaaataaatcagcatgacattgacaagaaaacacacacttagatgaat
aaagcagagaagatttccccagaaacagacacacacacatgtcaattcat
ttatgccaaaggagcaaaagtgattcaataagagagggaaatttctgtac
agatttatgctggggaaatttaaattacagatggtgaaaacaaatttatt
ttcaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4433378_4434113
seq2: B6Ng01-338C04.g_332_1075

seq1  GGGAAACAGAAACTTAGGCCCAGTTTCCTGAACTGCCAATTTGAAGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAGAAACTTAGGCCCAGTTTCCTGAACTGCCAATTTGAAGCCTG  50

seq1  TCACGGAGTCAGTTTGACTAATCCTCTCACCTGCTTTCTTGTAGAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGAGTCAGTTTGACTAATCCTCTCACCTGCTTTCTTGTAGAAAGCA  100

seq1  GTTCAGGCATGGCACTACCCACAGTGGGTTGGGCCCTCCCCCATTAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGCATGGCACTACCCACAGTGGGTTGGGCCCTCCCCCATTAATCA  150

seq1  CTAATTGGAAAAACATATTATCGCTGGATTTCATGGAGGCATTTGCTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGGAAAAACATATTATCGCTGGATTTCATGGAGGCATTTGCTCAA  200

seq1  CTGAGGCTCCTTTCCCTCTGACTACTCCAGCTTATATTGACACACAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTCCTTTCCCTCTGACTACTCCAGCTTATATTGACACACAAAAC  250

seq1  AGCCAGTACAATTGGATTAACAGTTTATAATGAAGGGAGGCCAGGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTACAATTGGATTAACAGTTTATAATGAAGGGAGGCCAGGCCATT  300

seq1  AGTTTAAGGAAGAAACCTGGAAACAGGAGCTGAAGCAGAGATCAGGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAGGAAGAAACCTGGAAACAGGAGCTGAAGCAGAGATCAGGGAGG  350

seq1  AGCACTGCTTACTGGTTTGATCAATTAAGAAAATGCCCCAAAGTCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCTTACTGGTTTGATCAATTAAGAAAATGCCCCAAAGTCTTGCC  400

seq1  TATGGGCAATTTAAT-GGGGTCA-TTTTCTCATAGGAGGTTCTCTCTTCC  448
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  TATGGGCAATTTAATGGGGGTCATTTTTCTCATAGGAGGTTCTCTCTTCC  450

seq1  CAGATGACTCTAGCTTGTATCAAGCTGACAAAGACACTTACCAGAACAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGACTCTAGCTTGTATCAAGCTGACAAAGACACTTACCAGAACAGC  500

seq1  TACAAAAAGAAG-AAACAAAACCACCCCCCTATGTCAGAAAATAAATCAG  547
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAGAAGAAAACAAAACCACCCCCCTATGTCAGAAAATAAATCAG  550

seq1  CATGACATTGACAAGAAAACACACACTTAGATGAATAAAGCAGAGAAGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACATTGACAAGAAAACACACACTTAGATGAATAAAGCAGAGAAGAT  600

seq1  TTCCCCAGAAACAGACACACACACATGTCAATTCATTTATGCCAAAGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGAAACAGACACACACACATGTCAATTCATTTATGCCAAAGGAG  650

seq1  CAAAAGTGATTCAATAAGAGAGG--AAATTCTGTTACAGA-TTATGCTGG  694
      |||||||||||||||||||||||  || ||||| |||||| |||||||||
seq2  CAAAAGTGATTCAATAAGAGAGGGAAATTTCTG-TACAGATTTATGCTGG  699

seq1  GGAAATTAGATATACAGAT-GTGAAAACAAATT--ATTTCAGGGA  736
      |||||||  |  ||||||| |||||||||||||   |||||||||
seq2  GGAAATTTAAATTACAGATGGTGAAAACAAATTTATTTTCAGGGA  744