BAC Information

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BAC

Clone NameB6Ng01-341A22
Chromosome8 (Build37)
Map Location 52,775,589 - 52,776,746
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341A22.bB6Ng01-341A22.g
ACCGA124560GA124561
length1,157850
definitionB6Ng01-341A22.b B6Ng01-341A22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaagaaactaagataaaattgccaccggggctatgtgcttct
atacttgacttctcttcaatagagtctaggaattattgtaagtcatatac
cctgatcataacgtgtctttgctccaactctaatggtttgcattttgctc
acagtaaaaatcaaaaggactgtaacagtgacaggttgtagagtcactac
tgcccacgggctccattaacccactgagattacttcttgcctacttggat
gttccttcaatgtcttgtttgatttgacacagattccttattctagtctt
atctggataaaacttctagaagattgtgtaggaactctttgtgcctgttt
cagacctttgctcaactctcatgtccttataaagttctggcatgaccttc
acatttaagatagcaagatacatccattcccttactctgtatggttaatc
acaaggaggtcattttaactcccaattattattattattatttaatttag
tacatattggatatctcttcttgtgaaatgtttgctaactgatggtacta
attgtttactcacatgtaactttcctgactgacacaaagaggaaactttt
tgaaattgtccccttaggtagcatgagaagtagctctcaccaagctatca
tgagttcactctctctagagatcatttaaataaaataatttctgagtttg
atcctagaaagtaggaatgactcttagtaaaatctttcacaagtgaactt
aaaataagggtttgacatttgtttcatccagaattgatgttctatatgta
ttaattttactctatccttcagttttctaccaagacaatatttatagtaa
tacctataaatctatgggttgattatattttgttgtatttttatttatat
tttaatgtatgcgtttctgaacttctatgaatatctgctccacagaacac
atgtggatactgcttttcagtggtactcagttctttttcctccagggata
ttgagttcctggtagaactcaagtagctgaaaaaatgcaagtatcatctg
cctatttggtgagcttcatttgacaggcccgaagctattttacaggcagg
acttgtagaacagtgttattctattacaatatgataccattattcagatt
gactttt

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttatcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggacccagatgtagctgtctcttgtgagactatgccggggcctag
caaacacagaagtggatgcccacagtcagctaatggatggatcacagggc
tcccaatggaggagctagagaaagtacccaaggagctaaagggatctgca
accctataggtggatcaacattatgaactaaccagtaccccggagctctt
gactctagctgcatatgtatcaaaaggatggcctagtcggccatcactgg
aaagagaggcccattggacacacaaactttatatgccccagaacagggga
atgccagggccaaaaagggggagtgggcgggtaggggaagtcggggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52775589_52776746
seq2: B6Ng01-341A22.b_46_1202

seq1  GAATTCATAAAGAAACTAAGATAAAATTGCCACCGGGGCTATGTGCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAGAAACTAAGATAAAATTGCCACCGGGGCTATGTGCTTCT  50

seq1  ATACTTGACTTCTCTTCAATAGAGTCTAGGAATTATTGTAAGTCATATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGACTTCTCTTCAATAGAGTCTAGGAATTATTGTAAGTCATATAC  100

seq1  CCTGATCATAACGTGTCTTTGCTCCAACTCTAATGGTTTGCATTTTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCATAACGTGTCTTTGCTCCAACTCTAATGGTTTGCATTTTGCTC  150

seq1  ACAGTAAAAATCAAAAGGACTGTAACAGTGACAGGTTGTAGAGTCACTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAAATCAAAAGGACTGTAACAGTGACAGGTTGTAGAGTCACTAC  200

seq1  TGCCCACGGGCTCCATTAACCCACTGAGATTACTTCTTGCCTACTTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACGGGCTCCATTAACCCACTGAGATTACTTCTTGCCTACTTGGAT  250

seq1  GTTCCTTCAATGTCTTGTTTGATTTGACACAGATTCCTTATTCTAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCAATGTCTTGTTTGATTTGACACAGATTCCTTATTCTAGTCTT  300

seq1  ATCTGGATAAAACTTCTAGAAGATTGTGTAGGAACTCTTTGTGCCTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGATAAAACTTCTAGAAGATTGTGTAGGAACTCTTTGTGCCTGTTT  350

seq1  CAGACCTTTGCTCAACTCTCATGTCCTTATAAAGTTCTGGCATGACCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTTGCTCAACTCTCATGTCCTTATAAAGTTCTGGCATGACCTTC  400

seq1  ACATTTAAGATAGCAAGATACATCCATTCCCTTACTCTGTATGGTTAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAAGATAGCAAGATACATCCATTCCCTTACTCTGTATGGTTAATC  450

seq1  ACAAGGAGGTCATTTTAACTCCCAATTATTATTATTATTATTTAATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGGTCATTTTAACTCCCAATTATTATTATTATTATTTAATTTAG  500

seq1  TACATATTGGATATCTCTTCTTGTGAAATGTTTGCTAACTGATGGTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTGGATATCTCTTCTTGTGAAATGTTTGCTAACTGATGGTACTA  550

seq1  ATTGTTTACTCACATGTAACTTTCCTGACTGACACAAAGAGGAAACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTACTCACATGTAACTTTCCTGACTGACACAAAGAGGAAACTTTT  600

seq1  TGAAATTGTCCCCTTAGGTAGCATGAGAAGTAGCTCTCACCAAGCTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTCCCCTTAGGTAGCATGAGAAGTAGCTCTCACCAAGCTATCA  650

seq1  TGAGTTCACTCTCTCTAGAGATCATTTAAATAAAATAATTTCTGAGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCACTCTCTCTAGAGATCATTTAAATAAAATAATTTCTGAGTTTG  700

seq1  ATCCTAGAAAGTAGGAATGACTCTTAGTAAAATCTTTCACAAGTGAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGAAAGTAGGAATGACTCTTAGTAAAATCTTTCACAAGTGAACTT  750

seq1  AAAATAAGGGTTTGACATTTGTTTCATCCAGAATTGATGTTCTATATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGGGTTTGACATTTGTTTCATCCAGAATTGATGTTCTATATGTA  800

seq1  TTAATTTTACTCTATCCTTCAGTTTTCTACCAAGACAATATTTATAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTACTCTATCCTTCAGTTTTCTACCAAGACAATATTTATAGTAA  850

seq1  TACCTATAAATCTATGGGTTGATTATATTTTGTTGTATTTTTATTTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATAAATCTATGGGTTGATTATATTTTGTTGTATTTTTATTTATAT  900

seq1  TTT-ATGTATGCGTTTCTGAACTTCTATGAATATCTGCTCCACAGAACAC  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTATGCGTTTCTGAACTTCTATGAATATCTGCTCCACAGAACAC  950

seq1  ATGTGGATACTGCTTTTCAGTGGTACTCAGTTCTTTTT-CTCCA-GGATA  997
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  ATGTGGATACTGCTTTTCAGTGGTACTCAGTTCTTTTTCCTCCAGGGATA  1000

seq1  -TGAGTCCCTGGTAGAACTCAGGTAGCTGAAAAAATGCAAGTAATCATCT  1046
       ||||| |||||||||||||| |||||||||||||||||||| |||||||
seq2  TTGAGTTCCTGGTAGAACTCAAGTAGCTGAAAAAATGCAAGT-ATCATCT  1049

seq1  GCCTTAATTTGTTGAGCTTCA-TTGACAGCCCAGAAGCTATTTTACAGCA  1095
      ||||  ||||| ||||||||| ||||||| || |||||||||||||||  
seq2  GCCT--ATTTGGTGAGCTTCATTTGACAGGCCCGAAGCTATTTTACAGGC  1097

seq1  AGAACCTGTAGAACAGTGTTATTCTATTTACAATATAATACCATTTAATT  1145
      || || |||||||||||||||||||| ||||||||| ||||||||  |||
seq2  AGGACTTGTAGAACAGTGTTATTCTA-TTACAATATGATACCATT--ATT  1144

seq1  ACAGA-TGACTTTT  1158
       |||| ||||||||
seq2  -CAGATTGACTTTT  1157


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