BAC Information

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BAC

Clone NameB6Ng01-345F03
Chromosome8 (Build37)
Map Location 52,746,936 - 52,748,043
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345F03.bB6Ng01-345F03.g
ACCGA127556GA127557
length1,1271,172
definitionB6Ng01-345F03.b B6Ng01-345F03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaattaatcacagcattttgcttctggtttatattcataatct
ttagtattttctagtatggccacctttatatatttggatttatgaacaac
taatttaaatactaattcctagcaagatgaagattcccactatagttctg
aagtaacatttcaacatctagatttctttctacttattatctgttgctct
actgaacctcgttttaatttttaccatacaatttagatattacacaaaga
tatcttatggcatccacacaaaaagtctctccagggacaacatatgaata
aaacctgaagcatggtagattttttttctttttaatgcaatagatagagt
gtaacacaaggaacaaatattctttgacctgttaagtcgataaaaatgca
ccataaaagagtaaaaaatgaaatgagtcagaattgagaactatatagcc
attattaatactatggttgttaaacctgttctcaagaaacagtgctcatc
aaaaaaggaattagatagatgaccagatgaaatgtagttctcaatgataa
gcacttcttaaaatgaattaattataaacacgatgtcagacatttagcaa
tttagaaaaaccatttgattaagaattacatatatacaaataatgtgtat
tgattagctatcccattttttctttctccctttcctcctaagtttgtttt
cctcttttatataaatctatcaaaacacattctttttttgtttgtttgtt
ttggttttttttttgttttttctttccattttttattaggtatttagcac
atttacatttccaatgctatacccaaaagtcccccatacccacccacccc
cactcccctacccacccactcccctttttggccctggcgttcccctgtac
tggggcatataaagtttgcgtgtccaatgggccttctctttccagtgatg
ggcccgaactaagcccatcttttgatacatatggcagctagagttcaaga
gctccgggttactgggttagttcataatggttttgtccaccttataggat
tgcagaatccctttagcctctttgcctactttcctctagctccctccaat
gggagccatgtgaattccaatccatta

gaattcatagaaagaaacacaccaaaaattttctcatggtatgctgactg
attcttcccatgtctaaggactttactttatagagccgtgtgctttattc
tacattgaacagttgctattgattcttgtttggtatttcctaattgtact
atactgctgctactcattcattcatgtttgaggtttcatacctgcctact
gatatcctaacaacaaagctaataattgcgccaaatgattactttccaga
tcctttttgtcctattaaccatctttatcccataccttaggttggtgggc
taaaagggaggtttaaacatttaaggacccttattaaaataggttttgaa
aactctgagcctaaaagtggtacccaatgtgacttaggcattatgagaaa
catcccttctaatgtaatagaagaaaaggcagattttgatgtggtggaag
tgttgcttaaggaggtttgcaaaatagcagcatcagcactggttggtctt
ctgccttgctcccagaggaggttttctggtttggcttcatataccacatt
ggtggagggaatgttgaaaatccagaagattcactaaattctctcatgct
agaaaatattgtagagttggctatacagttagagagtttgcaaatggagg
ttgaagtacttagaaggcaaaaagagctagtgcgagaacaatagggttca
ggcttcatgtctgagaccatgaatgtatcagacagtgaaaaagggaacga
aacttggttggaatgcaaattgctgccccgatctgttccatgtagtttac
ccagggcaccttagtgagacaaggagttaggaagagcaagaggcagaaca
gggatactttttagtgttcagcccagtccaccaccagaggatttgcttgg
ggcaacactagtaccttcagcctttccagtctttgctatgctgctataag
cctactaacatggtagtcatcctttataataacccgacatgcttaagatt
tagaaatttccagaccttaaagattttttaaaaatgcctaatttatattt
gtattagcttggcttcttcaatttgtttaaaagaaattattaagttactg
gtgattgggagcataactgatcttcagattggaaatgataggatccagcc
tggtggccttggatatcatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52746936_52748043
seq2: B6Ng01-345F03.b_45_1171

seq1  GAATTCAAAATTAATCACAGCATTTTGCTTCTGGTTTATATTCATAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTAATCACAGCATTTTGCTTCTGGTTTATATTCATAATCT  50

seq1  TTAGTATTTTCTAGTATGGCCACCTTTATATATTTGGATTTATGAACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTTTCTAGTATGGCCACCTTTATATATTTGGATTTATGAACAAC  100

seq1  TAATTTAAATACTAATTCCTAGCAAGATGAAGATTCCCACTATAGTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAATACTAATTCCTAGCAAGATGAAGATTCCCACTATAGTTCTG  150

seq1  AAGTAACATTTCAACATCTAGATTTCTTTCTACTTATTATCTGTTGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACATTTCAACATCTAGATTTCTTTCTACTTATTATCTGTTGCTCT  200

seq1  ACTGAACCTCGTTTTAATTTTTACCATACAATTTAGATATTACACAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACCTCGTTTTAATTTTTACCATACAATTTAGATATTACACAAAGA  250

seq1  TATCTTATGGCATCCACACAAAAAGTCTCTCCAGGGACAACATATGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTATGGCATCCACACAAAAAGTCTCTCCAGGGACAACATATGAATA  300

seq1  AAACCTGAAGCATGGTAGATTTTTTTTCTTTTTAATGCAATAGATAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAAGCATGGTAGATTTTTTTTCTTTTTAATGCAATAGATAGAGT  350

seq1  GTAACACAAGGAACAAATATTCTTTGACCTGTTAAGTCGATAAAAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACAAGGAACAAATATTCTTTGACCTGTTAAGTCGATAAAAATGCA  400

seq1  CCATAAAAGAGTAAAAAATGAAATGAGTCAGAATTGAGAACTATATAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAGAGTAAAAAATGAAATGAGTCAGAATTGAGAACTATATAGCC  450

seq1  ATTATTAATACTATGGTTGTTAAACCTGTTCTCAAGAAACAGTGCTCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATACTATGGTTGTTAAACCTGTTCTCAAGAAACAGTGCTCATC  500

seq1  AAAAAAGGAATTAGATAGATGACCAGATGAAATGTAGTTCTCAATGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAATTAGATAGATGACCAGATGAAATGTAGTTCTCAATGATAA  550

seq1  GCACTTCTTAAAATGAATTAATTATAAACACGATGTCAGACATTTAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCTTAAAATGAATTAATTATAAACACGATGTCAGACATTTAGCAA  600

seq1  TTTAGAAAAACCATTTGATTAAGAATTACATATATACAAATAATGTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAAACCATTTGATTAAGAATTACATATATACAAATAATGTGTAT  650

seq1  TGATTAGCTATCCCATTTTTTCTTTCTCCCTTTCCTCCTAAGTTTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGCTATCCCATTTTTTCTTTCTCCCTTTCCTCCTAAGTTTGTTTT  700

seq1  CCTCTTTTATATAAATCTATCAAAACACATTCTTTTTTTGTTTGTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTATATAAATCTATCAAAACACATTCTTTTTTTGTTTGTTTGTT  750

seq1  TTGG-TTTTTTTTTGTTTTTTCTTTCCATTTTTTATTAGGTATTTAGCAC  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTTTTTTGTTTTTTCTTTCCATTTTTTATTAGGTATTTAGCAC  800

seq1  ATTTACATTTCCAATGCTATA-CCAAAAGTCCCCCATACCCACCCACCCC  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTTACATTTCCAATGCTATACCCAAAAGTCCCCCATACCCACCCACCCC  850

seq1  CACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTA  898
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CACTCCCCTACCCACCCACT-CCCCTTTTTGGCCCTGGCGTTCCCCTGTA  899

seq1  CTGGGGCATATAAAGTTTGCGTGTCCAATGGGCC-TCTCTTTCCAGTGAT  947
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTTCTCTTTCCAGTGAT  949

seq1  GG---CCAACT-AGGCCATCTTTTGATACATAT-GCAGCTAGAG-TCAAG  991
      ||   | |||| || |||||||||||||||||| |||||||||| |||||
seq2  GGGCCCGAACTAAGCCCATCTTTTGATACATATGGCAGCTAGAGTTCAAG  999

seq1  AGCTCCGGGGTACT-GGTTAGTTCATAATG--TTGTTCCACC-TATAGGG  1037
      ||||||||| |||| |||||||||||||||  ||  |||||| |||||| 
seq2  AGCTCCGGGTTACTGGGTTAGTTCATAATGGTTTTGTCCACCTTATAGGA  1049

seq1  TTGCAG-ATCCCTTTAG-CTCCTTGGCTACTTT-CTCTAGCT-CCTCCAT  1083
      |||||| |||||||||| ||| ||| ||||||| |||||||| |||||| 
seq2  TTGCAGAATCCCTTTAGCCTCTTTGCCTACTTTCCTCTAGCTCCCTCCAA  1099

seq1  TGGGAGCCCTGTGA--TCC-ATCCATTA  1108
      |||||||| |||||  ||| ||||||||
seq2  TGGGAGCCATGTGAATTCCAATCCATTA  1127


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