BAC Information

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BAC

Clone NameB6Ng01-349I22
Chromosome8 (Build37)
Map Location 73,344,382 - 73,345,494
singlet/doubletsinglet
Overlap geneIl12rb1
Upstream geneGmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26, Tmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell, Isyna1, Ssbp4, Lrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3
Downstream geneArrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991, LOC665996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349I22.bB6Ng01-349I22.g
ACCGA130518GA130519
length1,1041,198
definitionB6Ng01-349I22.b B6Ng01-349I22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgactctgtcccccctctttttaggcttggcagtggtgcaac
cctgaggacttcccggaggtgttgtacccgcgagatgcgctggtggtcga
gatgcccggagacagaggcgacgggacagagtcgccccaggccgcccctg
agtgcgccctggacacaaggcggcccttggagactcagaggcagaggcag
gtgcaggcactgtcagaggccaggcgcctgggcctggctagggaggactg
tccccgtggtgacctggcccacgtgacactcccgctgctcctgggaggtg
tgacccagggagcctctgtacttgacgatctttggaggacccataagact
gcggagccgggaccgcccactttggggcaagaggcctgactgttgcatct
ccagcctgctccctcctcaggagcccctaaactgcaacagctggtcataa
tggctgtcctattttatagatgtgattcttgaggcccagagaaggtgact
gtcttgcctgatgtcacacagcgtttgcaggacgcagacccaggcctttc
tcccggttctgtagcacccttctcttctcccacccactccctccagcgcc
tatagccacaccgcctgtgaggggaacatggaaacctccaagaaggggaa
agtgcttcatgcagctttgcttggtatcctcagggcaaggctggacccta
tcactggtctgtttatttttgggggggtccttccagtctgaggggacatg
gtcagtcacaggctcagtttgcctccagcgtccttggctggggtcacaga
atgactctagagcgtcataaattaggttacctaaaaagcagggcctagac
attcacgggaagtttatacgtctggactcagtttccctattagagtattg
ggcacttaataaatgggcctttcccagagactgagaaactaaatctgggc
cgtcgtgtgcacgtctgtcatcccatacccagagcagctgcagaaagatg
agctttgactgcaaagcgagtccgaggtagcctgggctacatgagaccct
gtctgagacagtgtgacaggtcactagatcgagaataagacctggtagta
caga
gaattctcagaacagagaacatacagatcgccagagcagccagggcttct
gaaatttccccagcagctcctccaggacatgcaacacagcgcagatcctt
ctgaaatttccccagcagctcctccaggacatgcaacacagcgcagatcc
ttctgaaatttccccagcagctcctccaggacatgcaacacagcgcagat
ccttcacaacctggactatgactttctctcctatacgcgatggcttggac
gctctgcctcatcatgaaagctggtctctgttcaggatctttgtacacct
atttcttctgcctaaaacttactttaggccttcacattgagatgttaaat
acctagctctttggtataatggaccataggggacaattaaatatatctaa
acatctctaaaggataggtctttcctgtaagtaccgtattagtgcttatt
tttccttaatttccagggcagtttgactccataattgctagacctgtccc
tggtgtcacgctgccttactggagcactaccagactgccatctggctgaa
ctacctatataaaataagctggctaaccaatgggttaccaaacaggcaag
aaaatcaaaagtaagtatttctgattttatacatgctacagtaggaagtg
caactttcactaccagatgcccagagcaccttcatgagacaaggggccgg
aaatagcagcaaacaattcagggacaatgggttagtgttcagccaggtgc
actgccagaggatttgcttggggctgcacagggaccttcagacttcccag
tttttgtgcagcatatgcatgctaatgatggtggtcactgtttgtaatga
atttacctggtgtcacatagacacactacaccctaaagcattgtaaagag
gtagtggcatagtaactgagttatgcagcataagagttattccccaaatt
ggaaaggaattggtgtcagctgtactagaagctgaacaacaattacagtg
gttgttgtggtagagcatgaagccacaaaaattggacagtgtaataaagc
aaggggggaataaatgttgcttacagaccacttcttgataagagtgatac
gctgactgttaaaagccaatccctattctgatgatgtttgcatggaccaa
tgtttgtgtttgcggcttagagccttgggagaatagagttgaggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_73344382_73345494
seq2: B6Ng01-349I22.b_43_1146

seq1  GAATTCACTGACTCTGTCCCCCCTCTTTTTAGGCTTGGCAGTGGTGCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGACTCTGTCCCCCCTCTTTTTAGGCTTGGCAGTGGTGCAAC  50

seq1  CCTGAGGACTTCCCGGAGGTGTTGTACCCGCGAGATGCGCTGGTGGTCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGACTTCCCGGAGGTGTTGTACCCGCGAGATGCGCTGGTGGTCGA  100

seq1  GATGCCCGGAGACAGAGGCGACGGGACAGAGTCGCCCCAGGCCGCCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCGGAGACAGAGGCGACGGGACAGAGTCGCCCCAGGCCGCCCCTG  150

seq1  AGTGCGCCCTGGACACAAGGCGGCCCTTGGAGACTCAGAGGCAGAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGCCCTGGACACAAGGCGGCCCTTGGAGACTCAGAGGCAGAGGCAG  200

seq1  GTGCAGGCACTGTCAGAGGCCAGGCGCCTGGGCCTGGCTAGGGAGGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGCACTGTCAGAGGCCAGGCGCCTGGGCCTGGCTAGGGAGGACTG  250

seq1  TCCCCGTGGTGACCTGGCCCACGTGACACTCCCGCTGCTCCTGGGAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGTGGTGACCTGGCCCACGTGACACTCCCGCTGCTCCTGGGAGGTG  300

seq1  TGACCCAGGGAGCCTCTGTACTTGACGATCTTTGGAGGACCCATAAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAGGGAGCCTCTGTACTTGACGATCTTTGGAGGACCCATAAGACT  350

seq1  GCGGAGCCGGGACCGCCCACTTTGGGGCAAGAGGCCTGACTGTTGCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGCCGGGACCGCCCACTTTGGGGCAAGAGGCCTGACTGTTGCATCT  400

seq1  CCAGCCTGCTCCCTCCTCAGGAGCCCCTAAACTGCAACAGCTGGTCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGCTCCCTCCTCAGGAGCCCCTAAACTGCAACAGCTGGTCATAA  450

seq1  TGGCTGTCCTATTTTATAGATGTGATTCTTGAGGCCCAGAGAAGGTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTATTTTATAGATGTGATTCTTGAGGCCCAGAGAAGGTGACT  500

seq1  GTCTTGCCTGATGTCACACAGCGTTTGCAGGACGCAGACCCAGGCCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCCTGATGTCACACAGCGTTTGCAGGACGCAGACCCAGGCCTTTC  550

seq1  TCCCGGTTCTGTAGCACCCTTCTCTTCTCCCACCCACTCCCTCCAGCGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGTTCTGTAGCACCCTTCTCTTCTCCCACCCACTCCCTCCAGCGCC  600

seq1  TATAGCCACACCGCCTGTGAGGGGAACATGGAAACCTCCAAGAAGGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCACACCGCCTGTGAGGGGAACATGGAAACCTCCAAGAAGGGGAA  650

seq1  AGTGCTTCATGCAGCTTTGCTTGGTATCCTCAGGGCAAGGCTGGACCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCATGCAGCTTTGCTTGGTATCCTCAGGGCAAGGCTGGACCCTA  700

seq1  TCACTGGTCTGTTTATTTTTGGGGGGGTCCTTCCAGTCTGAGGGGACATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGTCTGTTTATTTTTGGGGGGGTCCTTCCAGTCTGAGGGGACATG  750

seq1  GTCAGTCACAGGCTCAGTTTGCCTCCAGCGTCCTTGGCTGGGGTCACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCACAGGCTCAGTTTGCCTCCAGCGTCCTTGGCTGGGGTCACAGA  800

seq1  ATGACTCTAGAGCGTCATAAATTAGGTTACCTAAAAAGCAGGGCCTAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTAGAGCGTCATAAATTAGGTTACCTAAAAAGCAGGGCCTAGAC  850

seq1  ATTCACGGGAAGTTTATACGTCTGGACTCAGTTTCCCTATTAGAGTATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACGGGAAGTTTATACGTCTGGACTCAGTTTCCCTATTAGAGTATTG  900

seq1  GGCACTTAATAAATGGGCC-TTCCCAGAGACTGAGAAACTAAATCT-GGC  948
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  GGCACTTAATAAATGGGCCTTTCCCAGAGACTGAGAAACTAAATCTGGGC  950

seq1  CGTCGTGGTGCACGTCTGTCATCCCAATACCCAGGAGGCAGCTGCAGAAA  998
      |||||| |||||||||||||||||| ||||||||   |||||||||||||
seq2  CGTCGT-GTGCACGTCTGTCATCCC-ATACCCAG--AGCAGCTGCAGAAA  996

seq1  GATGAGCTTGGACTGCAAAGCGAGTCCGAGGGTAGCCTGGGCTACATGAG  1048
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  GATGAGCTTTGACTGCAAAGCGAGTCCGA-GGTAGCCTGGGCTACATGAG  1045

seq1  ACCCTGTCTGGAGGACAGTGTGGACA-GTCACCTAGAATTCCGAG-ATAA  1096
      ||||||||||   |||||||| |||| |||| |||||    |||| ||||
seq2  ACCCTGTCTG--AGACAGTGT-GACAGGTCA-CTAGA---TCGAGAATAA  1088

seq1  GACCTGGGTAGTACAGA  1113
      ||||| |||||||||||
seq2  GACCT-GGTAGTACAGA  1104