BAC Information

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BAC

Clone NameB6Ng01-350F07
Chromosome8 (Build37)
Map Location 99,862,575 - 99,984,022
singlet/doubletdoublet
Overlap geneLOC546090
Upstream geneLOC333331
Downstream geneLOC636859, EG384885, LOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350F07.bB6Ng01-350F07.g
ACCGA131034GA131035
length1,165402
definitionB6Ng01-350F07.b B6Ng01-350F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,862,575 - 99,863,761)(99,983,615 - 99,984,022)
sequence
gaattccatgtactgtcatgattgaccatttctgcctctgctgtttcgta
gagaatgattgaattctctctgacatgtctcttttgctccattttgtcca
accaagtttgtaaatgtcacaaatctcctaaccaccactgtcaaccaatc
aagatcaatttaggagatcagatgctctgtgattcctccaatcatatcta
tgtacacagggaaagaaagagaggcatgtggggaccatgtgctcccatga
ttgggtgaagtatgaagaagtaattcgatgcaatcgtcattccaacaagt
ggcttgctgtttctactgataacatggaattactgtcaagaatacagtgt
gggtctcatgtaaacaagttggacactcaaaagcagcaggacctaaaata
ggcctaatgatacagaatcatttattcagacctatctcaggactcagtga
acagggctcactctttgctgatggaagtactgaatgatcaatgaagtagc
aaaggaaagctgttgcccatatcagttgttttatcttgctctctctctcc
cttcctccctctgtccttcccttcccctctttttccctctccctctctcc
ctccctctcttgttttccctctctcctgcctctttccctccctccctctc
accctctttctcaccctctccaactctccctctcatactcttataggtat
caacatataatttgcaattctcatattttgtatagcttctttaggataaa
ttatatggctttttgaatagcatctcacttcatttctaaattaatttata
tctcttaaatgccatattttattctcaccccccatccaccctacgtctgt
tccacatcccatacctcctccccaacccctgtctccacgggatagcgccc
cccctcccccccaactctaaactccctcaggcctccagtctcttgagggt
taggtgcatcatcttctgatgaacacagacccgggagtctctactctatg
tgtgttggttgtgtgagagatgtgatgatcagatatgagactgctgtctt
ctacagatcgccttctctcagctcatcagcctactatccagcaacatgtt
cagctgctgctgtccatggtgagacaatctgcattctgactcttcaacag
gttgttgccatcttt

aataaaataaaatgtaaatctgattcctgacaggaaaggaaactgatacg
taggtagatctaacgcatagtgagtttgagattagctgttgtcctgaggg
ctcagattggagactgagactgtgaggcacaaatgttcttgcaagtaatg
cttagagaaatggataaataattattctgtcacttaaaatgaggattgta
agagacagaatcaacataaaggaggacaaaacagtctcagatattttaga
aaaaaatactaggtggttctttgaaactgatctcggtctttcagattaga
ctacgggtttgagagtcagtaacatagaggttatcactgaatcatgagag
ttaatgatggtccaggaagaattcgtggtctatgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99862575_99863761
seq2: B6Ng01-350F07.b_45_1209

seq1  GAATTCCATGTACTGTCATGATTGACCATTTCTGCCTCTGCTGTTTCGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTACTGTCATGATTGACCATTTCTGCCTCTGCTGTTTCGTA  50

seq1  GAGAATGATTGAATTCTCTCTGACATGTCTCTTTTGCTCCATTTTGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGATTGAATTCTCTCTGACATGTCTCTTTTGCTCCATTTTGTCCA  100

seq1  ACCAAGTTTGTAAATGTCACAAATCTCCTAACCACCACTGTCAACCAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTTGTAAATGTCACAAATCTCCTAACCACCACTGTCAACCAATC  150

seq1  AAGATCAATTTAGGAGATCAGATGCTCTGTGATTCCTCCAATCATATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAATTTAGGAGATCAGATGCTCTGTGATTCCTCCAATCATATCTA  200

seq1  TGTACACAGGGAAAGAAAGAGAGGCATGTGGGGACCATGTGCTCCCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAGGGAAAGAAAGAGAGGCATGTGGGGACCATGTGCTCCCATGA  250

seq1  TTGGGTGAAGTATGAAGAAGTAATTCGATGCAATCGTCATTCCAACAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGAAGTATGAAGAAGTAATTCGATGCAATCGTCATTCCAACAAGT  300

seq1  GGCTTGCTGTTTCTACTGATAACATGGAATTACTGTCAAGAATACAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTGTTTCTACTGATAACATGGAATTACTGTCAAGAATACAGTGT  350

seq1  GGGTCTCATGTAAACAAGTTGGACACTCAAAAGCAGCAGGACCTAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCATGTAAACAAGTTGGACACTCAAAAGCAGCAGGACCTAAAATA  400

seq1  GGCCTAATGATACAGAATCATTTATTCAGACCTATCTCAGGACTCAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAATGATACAGAATCATTTATTCAGACCTATCTCAGGACTCAGTGA  450

seq1  ACAGGGCTCACTCTTTGCTGATGGAAGTACTGAATGATCAATGAAGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCTCACTCTTTGCTGATGGAAGTACTGAATGATCAATGAAGTAGC  500

seq1  AAAGGAAAGCTGTTGCCCATATCAGTTGTTTTATCTTGCTCTCTCTCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGCTGTTGCCCATATCAGTTGTTTTATCTTGCTCTCTCTCTCC  550

seq1  CTTCCTCCCTCTGTCCTTCCCTTCCCCTCTTTTTCCCTCTCCCTCTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCCTCTGTCCTTCCCTTCCCCTCTTTTTCCCTCTCCCTCTCTCC  600

seq1  CTCCCTCTCTTGTTTTCCCTCTCTCCTGCCTCTTTCCCTCCCTCCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCTTGTTTTCCCTCTCTCCTGCCTCTTTCCCTCCCTCCCTCTC  650

seq1  ACCCTCTTTCTCACCCTCTCCAACTCTCCCTCTCATACTCTTATAGGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTTTCTCACCCTCTCCAACTCTCCCTCTCATACTCTTATAGGTAT  700

seq1  CAACATATAATTTGCAATTCTCATATTTTGTATAGCTTCTTTAGGATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATATAATTTGCAATTCTCATATTTTGTATAGCTTCTTTAGGATAAA  750

seq1  TTATATGGCTTTTTGAATAGCATCTCACTTCATTTCTAAATTAATTTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGCTTTTTGAATAGCATCTCACTTCATTTCTAAATTAATTTATA  800

seq1  TCTCTTAAATGCCATATTTTATTCTCACCCCCCATCCACCCTACGTCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAAATGCCATATTTTATTCTCACCCCCCATCCACCCTACGTCTGT  850

seq1  TCCACATCCCATACCTCCTCCCCAACCCCTGTCTCCACGGGATAGCGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCCATACCTCCTCCCCAACCCCTGTCTCCACGGGATAGCGCCC  900

seq1  CCCCTCCCCCCCAACTCTAAACTCCCTCAGGCCTCCAGTCTCTTGAGGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCCCAACTCTAAACTCCCTCAGGCCTCCAGTCTCTTGAGGGT  950

seq1  TAGGTGCATCATC-TCTGAATGAACACAGACCCGGGAGTCCTCTACTCTA  999
      ||||||||||||| |||| |||||||||||||||||||| ||||||||||
seq2  TAGGTGCATCATCTTCTG-ATGAACACAGACCCGGGAGT-CTCTACTCTA  998

seq1  TGTGTGTTGGTTGTGTGAGAGATGGTGATGATCCAGATTAATTGAGACTG  1049
      ||||||||||||||||||||||| |||||||| |||||    ||||||||
seq2  TGTGTGTTGGTTGTGTGAGAGAT-GTGATGAT-CAGAT---ATGAGACTG  1043

seq1  CTGGTCCTCCTACAGGATCGCCCTTCTCCTCAGCTCCTTTCAGCCTTCCC  1099
      |||   || ||||| ||||| |||||| ||||||||   ||||||| |  
seq2  CTG--TCTTCTACA-GATCG-CCTTCT-CTCAGCTC--ATCAGCCTAC--  1084

seq1  TAATTCAGCAACAATGGTCAGCTGCTGCTGTCCATTGGTTGAGTGCAAAT  1149
        || ||||||| ||| ||||||||||||||||||  | ||||    |  
seq2  -TATCCAGCAAC-ATGTTCAGCTGCTGCTGTCCAT--GGTGAG----ACA  1126

seq1  ATCTGCA-TCTGACTCTTTCAACAGTTTGTTG-CATCTTT  1187
      ||||||| |||||||| |||||||| |||||| |||||||
seq2  ATCTGCATTCTGACTC-TTCAACAGGTTGTTGCCATCTTT  1165


seq1: chr8_99983615_99984022
seq2: B6Ng01-350F07.g_66_473 (reverse)

seq1  CACACACACACACACACACATAGACCACGAATTCTTCCTGGACCATCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATAGACCACGAATTCTTCCTGGACCATCATT  50

seq1  AACTCTCATGATTCAGTGATAACCTCTATGTTACTGACTCTCAAACCCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCATGATTCAGTGATAACCTCTATGTTACTGACTCTCAAACCCGT  100

seq1  AGTCTAATCTGAAAGACCGAGATCAGTTTCAAAGAACCACCTAGTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAATCTGAAAGACCGAGATCAGTTTCAAAGAACCACCTAGTATTTT  150

seq1  TTTCTAAAATATCTGAGACTGTTTTGTCCTCCTTTATGTTGATTCTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAATATCTGAGACTGTTTTGTCCTCCTTTATGTTGATTCTGTCT  200

seq1  CTTACAATCCTCATTTTAAGTGACAGAATAATTATTTATCCATTTCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAATCCTCATTTTAAGTGACAGAATAATTATTTATCCATTTCTCTA  250

seq1  AGCATTACTTGCAAGAACATTTGTGCCTCACAGTCTCAGTCTCCAATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTACTTGCAAGAACATTTGTGCCTCACAGTCTCAGTCTCCAATCTG  300

seq1  AGCCCTCAGGACAACAGCTAATCTCAAACTCACTATGCGTTAGATCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCAGGACAACAGCTAATCTCAAACTCACTATGCGTTAGATCTACC  350

seq1  TACGTATCAGTTTCCTTTCCTGTCAGGAATCAGATTTACATTTTATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTATCAGTTTCCTTTCCTGTCAGGAATCAGATTTACATTTTATTTTA  400

seq1  TTGAATTC  408
      ||||||||
seq2  TTGAATTC  408


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