Query= MSMg01no045_a19.b1 MSMg01no045_a19.b1 CHROMAT_FILE:
MSMg01no045_a19.b1 PHD_FILE: MSMg01no045_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:54 2005
(342 letters)
>mm_chr8_55721968_55722709
Length = 742
Score = 601 bits (311), Expect = e-176
Identities = 335/343 (97%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 gtcttgaaccagaaag-attcctttacctcagcatcccatgctgagcttgtaaacatgag 59
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 200 gtcttgaaccagaaagaattcctttacctcagcatcctatgctgagcttgtaaacatgag 259
Query: 60 ctgccactctagtctgttagccatttattattaatactaacttttttgcttattgagact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgccactctagtctgttagccatttattattaatactaacttttttgcttattgagact 319
Query: 120 agatttctctctgtagccttgggtgtcctcaaactcactctatagaccaggccagtctca 179
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 agatttctctctgtagccttggatgtcctcaaactcactctatagaccaggccagtctcg 379
Query: 180 aactcagagctcctgcctctgatggtctgcaattaaaggtgtgtgccaccaccacccagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aactcagagctcctgcctctgatggtctgcaattaaaggtgtgtgccaccaccacccagc 439
Query: 240 ttattaatactaagctaacagagcatttttctctcacttgtcatcagtgaggtcactcaa 299
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 ttattaatactaatttaagagagcatttttctctcacttgtcatcagtgaggtcacacaa 499
Query: 300 actggacagattcaacattattttaatggtaatgatacaggct 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actggacagattcaacattattttaatggtaatgatacaggct 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_a19.g1 MSMg01no045_a19.g1 CHROMAT_FILE:
MSMg01no045_a19.g1 PHD_FILE: MSMg01no045_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:54 2005
(244 letters)
>mm_chr8_55868719_55869363
Length = 645
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 aacaccc-tattctcgacctttatggtcaaaaaaatacagcagaactcctatactgggac 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacacccttattctcgacctttatggtcaaaaaaatacagcagaactcctatactgggac 385
Query: 60 acttcctcgatgctagctaggtcagcccctgggcatcttagaaggttccttttggtaggc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acttcctcgatgctagctaggtcagcccctgggcatcttagaaggttccttttggtaggc 325
Query: 120 tttttcttggaaaccttcactattttcagaaaaacccaaagatggtcacagatgaaccta 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 324 tttttcttggaaaccttcactattttcagaaaaacccaaagatggtcacagttgaaccta 265
Query: 180 ccattaacagacactatcagctgccagctatttgcgagctatctcagatcatcagtttga 239
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 caattaacagacactatcagctgccagctatttgtgagctatctcagatcatcagtttga 205
Query: 240 tgaa 243
||||
Sbjct: 204 tgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
