Query= MSMg01no045_n04.b1 MSMg01no045_n04.b1 CHROMAT_FILE:
MSMg01no045_n04.b1 PHD_FILE: MSMg01no045_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:52 2005
(358 letters)
>mm_chr8_7665581_7666338
Length = 758
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%)
Strand = Plus / Plus
Query: 4 gaattcctacataattatctctgcaactttcagagttctaaacctatgatctttgactac 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctacataaagatctctgcaactttcagagttctaaacctatgatctttgactac 263
Query: 64 tttcaaagttcattcaattaggccagtatcacccagaaaaatctctaaatgatatcagtt 123
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcaaagttcattcaattcggccagtatcacccagaaaaatctctaaatgatatcagtt 323
Query: 124 tagagttaaatagtttggaaaattagtgtcttctgaactcttacatcttcacctctccaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagagttaaatagtttggaaaattagtgtcttctgaactcttacatcttcacctctccaa 383
Query: 184 aaaatatagcctgccactgttatgtcattccagagcagaaaatacctatatacattagaa 243
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaatatagcctgccactgttatgccattccagagcagaaaatacctatatacattagaa 443
Query: 244 gctccacttaaaggccatcaaggacaacactgttaaaatcccaccgaagtcattttcaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctccacttaaaggccatcaaggacaacactgttaaaatcccaccgaagtcattttcaga 503
Query: 304 gccttctaactacaacaaacaacattgaggctgaaattcaaagcgtctcccaact 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gccttctaactacaacaaacaacattgaggctgaaattcaaagcgtctcccaact 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_n04.g1 MSMg01no045_n04.g1 CHROMAT_FILE:
MSMg01no045_n04.g1 PHD_FILE: MSMg01no045_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:52 2005
(309 letters)
>mm_chr8_7821431_7822139
Length = 709
Score = 582 bits (301), Expect = e-171
Identities = 307/309 (99%)
Strand = Plus / Minus
Query: 1 atgaagacaagaagcagaattatgaaggcaacaaagcagagacaagatatgctgggcaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 509 atgaagacaagaagcagaattatgaaggcaacaaagcagagacaagatatgctgagcaga 450
Query: 61 aagggatggaaaccaaattttggagaaagatgagttcaaaagaactaaattcatagtgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aagggatggaaaccaaattttggagaaagatgagttcaaaagaactaaattcatagtgac 390
Query: 121 atcttatgggtgtttggacagatggcacaacatgacaggaacaatagatatataaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atcttatgggtgtttggacagatggcacaacatgacaggaacaatagatatataaaataa 330
Query: 181 atcacaggttcattcagtgagtaaagtgacacattagaaagagaatcataaggatgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atcacaggttcattcagtgagtaaagtgacacattagaaagagaatcataaggatgaccc 270
Query: 241 taactggggagtagaaagactacatatctaaagtataggaaaactaacaagagtaagctg 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 269 taactggggagtagaaagactacatatctaaagtataggaaaactaaaaagagtaagctg 210
Query: 301 aactggaga 309
|||||||||
Sbjct: 209 aactggaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
