Query= MSMg01no046_k09.b1 MSMg01no046_k09.b1 CHROMAT_FILE:
MSMg01no046_k09.b1 PHD_FILE: MSMg01no046_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:51 2005
(359 letters)
>mm_chr8_80630299_80631058
Length = 760
Score = 648 bits (335), Expect = 0.0
Identities = 347/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Plus
Query: 10 ttctgcattcgcgttgc-aattctcaggtagatgccttgcacatgtgtcctgctgtgtgt 68
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttctgcattcgtgttgccaattctcaggtagatgccttgcacatgtgtcctgctgtgtgt 269
Query: 69 tgcatttctagaaaaataaagtgcttccttctccataattttccattaaaaaatgggact 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgcatttctagaaaaataaagtgcttccttctccataattttccattaaaaaatgggact 329
Query: 129 tctagcatcagctccattgatatcatttgtatagtttgacaagcaacattgacacatgaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctagcatcagctccattgatatcatttgtatagtttgacaagcaacattgacacatgaa 389
Query: 189 cttttgcaaggaaatcttgaggaaaataattcagtgcattgaaaaaattgctatctgaac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cttttgcaaggaaatcttgaggaaaataattcagtgcattgaaaaaattgctatctgaac 449
Query: 249 acattcctctctctagtacagaaaatcaatgtgttgggtgcgttctcatagcttttgctt 308
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 450 acattcctctctctagtacagaaaatcaatgtgttgggtgcattctcatagcttttgctt 509
Query: 309 tctgtcagtagtgtcacagggcttcagagtgccctcttgcttttggcattg 359
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tctgtcagtggtgtcacagggcttcagagtgccctcttgcttttggcattg 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 760
Length adjustment: 9
Effective length of query: 350
Effective length of database: 751
Effective search space: 262850
Effective search space used: 262850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_k09.g1 MSMg01no046_k09.g1 CHROMAT_FILE:
MSMg01no046_k09.g1 PHD_FILE: MSMg01no046_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:51 2005
(343 letters)
>mm_chr8_80809150_80809892
Length = 743
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%)
Strand = Plus / Minus
Query: 1 cccactgaaagcagtaattctactgttaaattagtcacagcttataaggctgtttattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cccactgaaagcagtaattctactgttaaattagtcacagcttataaggctgtttattgc 484
Query: 61 acgctgcattaattatctttattcagggctgtgacaaaatgcttgacaaagggggaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acgctgcattaattatctttattcagggctgtgacaaaatgcttgacaaagggggaagaa 424
Query: 121 agattgtggatgatggtttctgagatcttgatccagggcgcttgcctccactgttcctaa 180
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 423 agattgtggatgatggtttctgagatcttgatccagggcgcttacctcgactgttcctaa 364
Query: 181 gattgtgcacagagaggtggagcatcacagtagagggcagtggtgagcaaagagactccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gattgtgcacagagaggtggagcatcacagtagagggcagtggtgagcaaagagactccc 304
Query: 241 ctcacctcatgacgggcaggaggcagagagagacaaagatggagcccagaacaaggcaga 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcacctcatgatgagcaggaggcagagagagacaaagatggagcccagaacaaggcaga 244
Query: 301 gcagaaaatggacgccaagaacacactcccaagtccagagaca 343
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 243 gcagaaaatggaggccaagaacacactcccaagtccagagaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
