Query= MSMg01no048_a03.b1 MSMg01no048_a03.b1 CHROMAT_FILE:
MSMg01no048_a03.b1 PHD_FILE: MSMg01no048_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:27 2005
(779 letters)
>mm_chr8_70250171_70251349
Length = 1179
Score = 1408 bits (728), Expect = 0.0
Identities = 755/764 (98%)
Strand = Plus / Plus
Query: 16 gaattcacatcgtaatacgcatagctctgaaaattattgcatcaggtttgaagatacttt 75
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 216 gaattcacatcgtaatacgcatagatctgcaaattattgcatcaggtttgaagatacttt 275
Query: 76 ttattacatattttctttatttacctttcaaatgttatcccctttcctagtttcccctct 135
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 276 ttattagatattttctttatttacatttcaaatgttatcccctttcctagtttcccctct 335
Query: 136 gaaaatcccctatcccctccaccatcccacctactccccaacccacccactggcattccc 195
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gaaaatcccctatccccttcaccatcccacctactccccaacccacccactggcattccc 395
Query: 196 ctatactggggcatagaaccttcacaggaccaagggcctctcctcccattgatgacgaac 255
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atatactggggcatagaaccttcacaggaccaagggcctctcctcccattgatgacgaac 455
Query: 256 taggccttcctctgctacgtatgcagctagagccacaagttccaccatgtgttttctttg 315
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 456 taggccttcctctgctacatatgcagctagggccacaagttccaccatgtgttttctttg 515
Query: 316 attggtggtttagttccaaggagctctgggggtactggttggttcatattgatgttcctc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 attggtggtttagttccaaggagctctgggggtactggttggttcatattgatgttcctc 575
Query: 376 ctatggggcttcagaccccttcagctccttgggtcctgtctctaactccagatttgaaga 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ctatggggcttcagaccccttcagctccttgggtcctgtctctaactccagatttgaaga 635
Query: 436 tattttattctcaggtactataaagtacaatatagaaaggggcaaaactcatcaacatca 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tattttattctcaggtactataaagtacaatatagaaaggggcaaaactcatcaacatca 695
Query: 496 acgaaaaacatgctcagattctctttttgtcaaagcgttatttacttaatgccttattaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 acgaaaaacatgctcagattctctttttgtcaaagcgttatttacttaatgccttattaa 755
Query: 556 atagttacaattgatatatgtaatttaaaatgtctagcaagtggaatactcttgatgacc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 atagttacaattgatatatgtaatttaaaatgtctagcaagtggaatactcttgatgacc 815
Query: 616 actgagaacaatgagaaaagactgcaaacactcccctgcttaatgtcatgaggttgtaaa 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 actgagaacaatgagaaaagactgcaaacactcccctgcttaatgtcatgaggttgtaaa 875
Query: 676 tagaaatattagtaactaagacaggtaagactacaacatgactgttaactgctctcactt 735
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 876 tagaaatattagtaactaagacagataagactacaacatgactgttaactgctctcactt 935
Query: 736 gctcagaccacttgacacataaccatctctgtcacctttatgtc 779
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gctcagaccacttgacacataaccatctctgtcacctttatgtc 979
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 779
Length of database: 1179
Length adjustment: 10
Effective length of query: 769
Effective length of database: 1169
Effective search space: 898961
Effective search space used: 898961
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no048_a03.g1 MSMg01no048_a03.g1 CHROMAT_FILE:
MSMg01no048_a03.g1 PHD_FILE: MSMg01no048_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:28 2005
(443 letters)
>mm_chr8_70389838_70390680
Length = 843
Score = 694 bits (359), Expect = 0.0
Identities = 423/449 (94%), Gaps = 9/449 (2%)
Strand = Plus / Minus
Query: 4 tgcttggaggacctacaggagatccaaagagaggcctgatgccagctaggagcgacgccc 63
||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |
Sbjct: 610 tgcttggaggacctacaggagatccaaagagaggcctgatgccagctgggaggggtgggc 551
Query: 64 gtgttgtatttgcttttcagaagagatgttcaagtgaagttagcatgaacagactgtagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtgttgtatttgcttttcagaagagatgttcaagtgaagttagcatgaacagactgtagt 491
Query: 124 tgtggggctcagacagttgggtgtggtggtgatggaagatatgttcttgttccctggggc 183
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgtggggcacggacagttgggtgtggtggtgatggaagatatgttcttgttccctggggc 431
Query: 184 agttgccttgctgggggccagtgtgctaatgttaggaatgtaagatctgtttaattcgaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agttgccttgctgggggccagtgtgctaatgttaggaatgtaagatctgtttaattcgaa 371
Query: 244 atatagagaatcttgaaaggctatctggatagattggtgccccttacatttttagataag 303
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 370 atatagagaatcttgtaaggctatctggatagattggtgtcccttacatttttagataag 311
Query: 304 aacactgaggaattatcaaggttaggctctctttggacttgagacttttttcagggtctc 363
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 310 aacactgaggaattatcaaggttaggctcacaaaggacttgagacttttttcagggtctc 251
Query: 364 tcagacagtctctgttgtcaatagagtgtgatcatctgactgctgaa-gatc-------- 414
||||| | ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 250 tcagatattctctgttgtcaatagagtgtgatcatctgactgctgaatgacccagggaga 191
Query: 415 acaagactgatggtatgctatattctatt 443
|||||||||||||||||||||||||||||
Sbjct: 190 acaagactgatggtatgctatattctatt 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
