| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-048K04.T7 (MSMg01no048_k04.b1) | MSMg01-048K04.TJ (MSMg01no048_k04.g1) |
|---|
| ACC | AG278352 | AG278353 |
|---|
| length | 1,259 | 1,227 |
|---|
length of high quality
(start - end) | 466 (81 - 546) | 509 (78 - 586) |
|---|
| definition | CHROMAT_FILE: MSMg01no048_k04.b1 PHD_FILE: MSMg01no048_k04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:48 2005 | CHROMAT_FILE: MSMg01no048_k04.g1 PHD_FILE: MSMg01no048_k04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:48 2005 |
|---|
| singlet/doublet | --- | singlet |
|---|
| BLAST hit | no hit data | unique |
|---|
| sequence | NTTTACTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGGAGTTTTTGTTTCTCCTTTAAAACCCAAAAAGAAATACATAAGAATG
TGTTTTCATCATAATCTCAGGCGCGCCCTATGGGACTGCTTCAGACTGCC
TGCAGCAGCTGATGTGACTTGCCTCATGCTCTCAGAGGCATGATTCTGCC
AGGTGCAGATAATTTCTACAATTGTGTGACGTTTGGAATTTTGGGAACTT
TTCAGAGGATACATAAATGCTTGGGCCCTGAGAAGTAGCATGAGTGGCTG
TTGATCATTCAGGAAGATTCGGTTGCAGTTGGTTAGTGCCTGTGGTCACA
GAGGATTCAAGAAAGAAATTAGATTCAGGGAGCTCTCTGTTTCTGTCTCT
CTTTCTCTCTCTTTCTCTCTTTTCCTTCTCTATCCTCCCTTCTCTCCTTT
CTAGTGATAGGGTGAAACCAGGACGCTAAAGGGTGGGCAAAAGAAGAACA
CACAAAGTCACAAAGACCCAACTACAGACGAACGATAAAGTTTAAAACCT
GCCAGCAATTACACATCAGAGAAATGGTGTCAGTTCTGATTTGCAGTATA
ACAGCGTCTCTGAGCCCATCCCTAAAGCTTGTTACAGTTGTTTCCTTGTG
ACACACGTTGGGCTGCCTTTGACATAAAATGTTTTCCCTATATGCGAAGA
CTGTTCCTCAGAGGCTGTAGCTTTCCCAGTCTTTCCTGTACTCTGGAAAT
GCCCATGTCTTTAGTAAGATTTTTGTTTTTTTTGTTATATTTAGTTTTTA
AGTTTTTTTTAATTGACTATTTGATCTTTTTGTTTGTTGTTTCTTGATNA
TGCCATTTTGTGTTTTTTGTGTCTTTTTTTTTTTTTTATTTATATTTATT
TATTTATTTTTTGTTTTTTTTTTTTTTATTGATTTTTTTTTTTTTAAATT
TTTATTATTTTTTTGTTTTTTTTATTTATTTTTTCTTTATTTTTTTTCTT
TTTATTTTTCCATTTGTTTTTTTTATATTTTATTTTATTTATTTATTTAT
TTTTTTATTTTTTTTATTTATTTTAGTTCTTTTTTTTTTTTATTTTTTTT
TTTTTTATTATTATTTTTTTTATATATTTTTTATTGTTATTTAATTATTT
ATTTATTTATATTTTTATGTATTTTTATTTTCTATAATTTTTTTTTTTAT
TTATCATTTTCCTTTTTTTCCATTCTCTTCTTTTCTTCTATTTATTCACC
TTTCTTCTC
| TTTTTTAAGAGTGGTAGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTTATAAAATTACATATTCTGCAGGNGCCAAG
GAAGCCTGCCTTCAAAACTGATGCCACAACAGTGTTATATAAATTAAAAA
GGGAGGGTGAAACCCCCTTTGTATACAAAATTACAGCATTACATTTTAAG
TAAGCATAACTAACAAGTTTTGCATGGAACATCTAGGCTGATGTTTGGAA
TTATGTGACTTTTAAAAGCTAAGCAGGGAGAGAAGAAGCCAAGGAAGGTT
ACTGGGCTAGGAGGATGGAGCCATGGGGAGCTACTTCACCATCAGGGTTT
TGTCTTCTCATTGACAAAACTAGACTAGATCATCTCTCTTGGATCTTTAA
ACAGAACAAAATAAAGTTCCTTCTGTCCACCACCACTGTGATTCAGGCAC
ATTTCTCTTAACACTTGTAGTAAATAAAAGTAGGCATATGGCAGACATCA
TTTTGCAACAAAGCGTAATCTCTGAATGTTAATTATCCCTGGAACTACAA
GCCGCCTTTTCTCATCTTAGCTGATATGTTCCTGANCNNNGCNAGTTATT
ATCTACCAAGNATCCNNAGTATAGAAATGTTCAGTGCAGACTGCAGTTCC
TTAATGCTTAGCAATGATATATAACGCCTGTAGGAGAGTGACAAAGACTC
TCCTAAAGCAAAGCTAAGGGACCCTTTCAGATCCATGATGTGAAATGTAA
ACATCCTTTGGTTTTTGTTCAATATTTATATTGATAACTCTCTTCTGCAA
ACAAATAACAGTTTATTCCCATGTCTTTGAGACAGTGNAATGTGAAGGTT
GCAGTCTGGGCCTACTTGGGAGCTGACAGCTTGTAGTGAATTTGGAATGG
AAGACAGCAATGTGTTGGTATCATATATTTTGCATTTATTCTTTTCTTTC
CCTGGAAATTTTTAATACCCTCTGGCTTTGTATTTTTTCCCTAAAGGCTG
GTGTTTATCTCTACCCCTTTTGTTTGTTTTTATCATCTTTTTCCTTTTTC
TTTTAATTTTTTATTTTCTTTTCTCTTTATTTCATTTGTCTTATACTTTA
TTCTTCTTTTAATCATGTTCATCCTATTTTTTCATTTTATATCCTTCTTT
GTTACATTCTATCTTTTTTTCCCTTGATTCCTCCTATATTTCTTTTTGAA
TTTTCGAAGTTACTTCTTATTTTTCTT
|
|---|
| quality values | Open.Hide. 0 3 7 7 6 8 6 6 8 8 8 12 10 18 18 14 14 11 12 10 10 12 19 10 10 10 12 14 12 22 23 37 37 34 37 34 37 37 37 37 37 48 43 57 57 43 43 43 43 53
50 57 48 47 47 47 27 27 24 24 31 34 34 23 23 9 6 6 7 7 6 7 12 12 13 11 11 11 11 12 15 21 32 41 59 59 50 53 53 53 53 53 53 53 53 53 57 53 53 50
50 50 50 37 26 25 12 9 9 11 12 11 12 12 19 19 24 25 30 34 30 19 15 8 8 8 8 10 22 27 30 37 42 42 48 48 47 47 50 50 53 50 57 47 57 57 57 57 57 57
57 57 57 57 59 59 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 50 50 47 47 47 50 53 53 50 39 43 46 46 48 48 48 48 48 50 50 47 47 27 27 12 11 11 25
25 43 43 47 50 50 59 59 59 59 59 59 59 57 53 53 53 53 50 53 57 57 57 57 57 57 48 54 57 59 59 68 59 59 54 54 54 59 59 68 59 59 48 48 43 47 47 47 54 57
57 57 57 54 54 57 57 57 57 57 57 57 68 57 57 57 57 59 59 57 57 57 57 54 54 54 57 57 57 57 43 43 44 50 44 27 27 9 9 12 12 27 27 57 57 57 57 57 59 57
57 54 57 50 57 43 43 42 44 44 59 57 57 59 41 41 20 41 38 44 44 57 59 57 52 52 52 52 52 59 59 59 57 57 57 59 57 57 57 59 59 57 57 57 57 28 21 9 9 9
23 23 57 57 57 57 43 39 39 43 43 43 52 45 45 52 57 57 43 44 31 31 44 44 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 33 33 16
16 16 38 32 52 52 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 59 59 57 57 57 59 43 36 15 15 15 36 38 68 68 68 68 59 59 38 32 12 12
11 28 28 44 44 57 57 57 57 68 68 57 59 57 57 57 57 57 57 57 27 27 11 13 9 10 9 19 27 43 35 31 31 43 32 23 27 27 28 28 43 41 41 41 31 35 42 43 43 38
32 20 20 20 38 19 15 24 24 24 32 35 43 44 43 42 36 33 28 16 18 18 30 30 28 28 28 28 23 19 24 19 19 22 32 27 39 37 35 35 32 34 30 14 14 15 21 30 23 23
10 13 10 10 17 21 12 12 15 19 13 12 12 20 26 26 26 13 15 15 28 26 32 32 28 22 20 23 25 18 16 19 19 14 10 17 17 28 26 43 39 37 33 19 14 13 13 8 8 9
23 19 23 25 25 31 28 32 37 39 30 28 13 13 13 15 16 20 28 29 34 40 40 39 35 35 39 39 28 34 18 18 17 24 18 27 12 14 14 26 20 36 43 43 48 43 47 39 39 20
23 14 15 9 9 10 10 13 15 15 12 13 28 30 19 24 24 34 34 33 30 28 22 29 29 29 28 28 28 33 23 23 11 11 16 21 22 33 40 32 28 21 17 10 9 9 15 18 20 16
18 11 10 10 14 14 28 23 18 11 11 10 8 8 11 11 17 13 11 9 9 11 12 10 10 9 8 10 8 8 8 8 9 8 8 8 8 8 8 8 8 10 12 25 10 10 8 8 8 8
12 12 13 9 8 8 11 9 7 7 9 9 9 10 8 8 8 8 8 9 11 11 17 13 15 14 23 23 22 15 15 10 10 10 13 10 10 10 13 21 12 13 14 11 10 9 15 13 8 8
8 9 9 15 19 10 12 11 19 12 9 8 8 8 8 6 6 8 8 8 8 10 10 8 8 8 8 8 15 7 6 7 6 6 6 8 8 8 10 10 22 22 23 23 10 8 8 3 0 3
8 9 9 9 10 16 15 17 11 8 8 8 8 8 8 11 13 10 8 8 8 8 8 8 11 13 19 18 16 16 15 12 10 10 9 9 9 10 10 11 9 9 12 12 11 8 8 8 8 15
15 17 9 10 9 10 10 15 11 10 9 9 9 9 17 20 12 12 12 15 13 17 9 8 8 8 8 8 8 6 6 6 6 8 8 8 15 15 24 24 22 24 20 18 19 13 13 10 8 8
8 8 8 6 6 8 8 15 15 12 11 11 10 10 10 10 13 13 9 8 8 13 8 9 9 10 10 10 14 10 10 14 15 10 10 8 10 8 10 12 16 25 30 28 22 17 10 9 8 8
8 7 8 6 6 8 8 8 7 8 7 7 13 10 8 6 6 8 8 9 10 14 13 10 9 9 13 15 16 13 11 7 7 10 10 9 9 11 8 8 8 8 13 8 8 8 13 8 8 8
10 10 15 9 12 9 10 10 11 11 11 11 10 13 8 6 6 10 8 11 10 17 18 10 10 8 8 10 10 12 19 18 23 14 14 8 12 8 8 8 10 11 11 16 17 15 18 15 15 11
11 15 16 29 29 19 19 12 12 12 8 8 6 6 11 8 21 21 16 8 8 8 8 8 8 8 8 12 13 12 10 6 6 8 8 6 6 6 8 10 17 15 11 11 15 19 23 17 19 10
10 9 13 8 8 8 8 6 6 6 6 7 13 17 15 9 8 8 8 8 8 8 9 9 12 12 10 10 13 15 19 14 9 8 8 8 8 8 11 9 13 15 19 19 23 12 12 7 8 8
13 8 8 8 7 6 8 8 13 10 9 9 9 13 13 11 10 8 8 8 8 6 8 8 8 8 7 7 8 8 11 12 11 12 12 8 8 8 8 8 6 6 8 6 6 10 10 9 10 9
10 9 11 12 12 15 15 12 12 | Open.Hide.11 15 17 10 19 19 9 3 7 6 6 6 6 6 6 6 7 8 6 6 6 6 8 8 10 7 7 9 9 13 8 15 15 19 8 9 10 22 21 24 15 15 26 32 36 36 36 37 37 34
29 29 29 33 47 48 53 50 50 50 50 42 47 25 23 11 9 9 6 6 6 6 6 6 9 13 13 18 30 28 21 32 37 44 44 39 50 42 41 39 27 27 3 0 3 27 27 44 37 37
37 39 37 37 30 27 21 16 13 10 10 10 10 12 26 30 42 50 42 41 25 24 11 11 10 10 12 19 21 25 26 33 33 33 33 44 53 53 53 53 53 53 53 53 53 53 53 53 59 59
59 59 59 59 59 57 57 57 57 59 68 68 68 68 68 68 68 68 50 51 50 50 50 50 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 51 50 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 59 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 68 59 59 59 57 57 62
62 62 62 62 62 62 62 34 34 14 14 14 38 38 68 68 68 68 68 68 34 34 12 12 11 33 33 62 52 62 62 62 62 62 62 62 62 47 47 43 43 43 43 43 43 62 62 52 52 52
62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 38 34
16 18 15 14 14 13 15 26 38 47 62 62 59 59 59 57 59 59 68 57 57 57 57 57 57 57 57 28 28 13 16 13 15 13 12 12 9 9 9 28 28 57 57 59 57 57 59 52 43 43
43 43 57 57 57 59 59 59 57 68 68 57 57 38 34 19 11 11 27 34 12 13 13 38 38 59 59 35 35 31 44 44 52 52 43 43 52 57 43 43 35 59 43 43 42 43 43 50 59 59
59 59 59 57 48 48 48 44 44 43 30 26 12 12 12 27 32 59 48 57 57 59 59 57 57 43 42 30 30 37 27 27 23 23 28 41 47 54 44 44 28 28 28 44 44 59 59 43 43 22
15 8 8 8 19 21 41 34 30 20 17 17 29 41 44 57 30 30 14 14 14 30 30 48 39 30 26 14 14 30 30 39 27 27 3 0 3 0 0 0 3 3 0 3 9 9 9 9 9 9
8 8 8 8 6 6 6 6 8 3 0 3 29 29 3 0 0 3 29 27 59 59 59 59 59 59 59 59 59 59 57 57 48 59 59 59 57 34 34 23 34 34 40 40 43 44 43 40 40 47
47 47 47 68 68 68 68 59 59 48 59 59 59 57 68 68 68 68 68 68 68 68 34 34 11 10 10 10 10 21 21 48 48 48 43 43 48 57 40 43 43 30 28 12 12 12 12 23 24 37
37 37 37 37 33 37 37 36 36 32 31 31 39 39 39 39 32 31 27 32 24 25 28 39 43 43 36 46 39 59 35 47 47 48 48 41 41 42 41 39 59 37 26 26 28 29 29 37 34 34
28 25 25 34 34 41 39 39 39 34 34 39 44 44 44 37 32 28 28 32 28 25 30 22 28 28 37 39 46 46 41 33 33 31 30 25 30 43 41 41 39 35 31 28 28 28 34 34 29 29
12 12 12 26 17 24 24 19 15 15 18 11 26 26 39 39 39 30 24 10 10 10 19 15 8 8 8 8 17 9 9 9 15 15 9 8 3 0 3 8 8 12 13 10 8 8 8 10 13 23
24 26 12 12 10 11 10 9 9 8 8 8 8 10 10 10 13 9 9 9 9 10 9 10 10 10 10 9 9 9 9 10 14 16 9 12 12 13 9 9 9 9 10 10 6 6 6 7 8 6
8 8 9 9 9 10 11 9 8 8 8 8 15 19 23 19 9 8 8 8 8 8 8 13 7 7 8 10 10 15 8 8 6 6 8 8 8 8 8 9 10 12 16 21 16 12 10 9 9 9
12 11 8 8 8 10 8 8 10 14 19 19 8 8 8 8 8 10 10 10 10 10 10 10 12 13 17 7 6 6 6 8 8 11 19 12 10 6 6 8 8 8 10 10 10 8 8 8 8 8
8 6 6 8 8 8 8 10 10 10 11 10 14 12 15 21 15 19 8 15 9 9 8 10 8 8 8 8 10 11 11 12 10 11 11 11 11 13 17 18 12 9 9 9 9 11 15 9 13 9
9 9 9 8 8 7 7 11 12 13 19 12 9 9 9 12 15 10 8 8 8 8 8 8 8 10 8 8 8 11 11 8 8 8 8 10 10 12 11 13 10 10 11 10 10 10 7 8 7 8
8 10 10 10 11 9 12 8 8 8 8 8 8 9 9 10 8 8 8 8 8 8 8 8 9 9 10 15 14 24 24 20 19 18 12 9 9 8 10 8 8 8 8 8 8 10 15 16 12 9
9 8 8 8 8 8 8 8 8 9 8 8 8 8 8 10 15 12 15 14 8 8 8 8 8 8 6 8 8 8 8 8 11 13 10 12 9 9 12 13 7 9 9 12 17 10 6 6 8 6
6 8 6 6 6 6 8 11 8 8 6 6 6 7 8 8 8 8 8 8 12 10 10 8 8 8 8 |
|---|
