Query= MSMg01no050_b05.b1 MSMg01no050_b05.b1 CHROMAT_FILE:
MSMg01no050_b05.b1 PHD_FILE: MSMg01no050_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:47:54 2005
(426 letters)
>mm_chr8_93614615_93615440
Length = 826
Score = 777 bits (402), Expect = 0.0
Identities = 411/414 (99%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 15 ggaattc-ctatgtagaccaaacaggctttgaacttatgattttcttgcctctgtctctt 73
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ggaattcactatgtagaccaaacaggctttgaacttatgattttcttgcctctgtctctt 273
Query: 74 gagagctctgattatgaacatatatgacaccaagccagcctaactatttttcctagcaag 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gagagctctgattatgaacatatatgacaccaagccagcctaactatttttcctagcaag 333
Query: 134 aaatcctttttgtaattgttatgaggttgagctcctggaacctgatcacaataaagcttg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaatcctttttgtaattgttatgaggttgagctcctggaacctgatcacaataaagcttg 393
Query: 194 acttgtatgactgcttcacatctccacagttatattgaaaatctacaaactaggcagtgg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acttgtatgactgcttcacatctccacagttatattgaaaatctacaaactaggcagtgg 453
Query: 254 tagcgcacacctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcga 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tagcgcacacctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcga 513
Query: 314 ggccagcctggtctacagagtaagtattaggacagccagggctcaacaaaacaaaacaaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 514 ggccagcctggtctacagagtaagtattaggacagccagggctcaacaaaacaaaac-aa 572
Query: 374 aaaa-gaaagaaagaacaaaagaaacaaaaatgtcacacattcaggaaagtgaa 426
|||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaaaagaaagaaagaacaaaagaaacaaaaatgtcacacattcaggaaagtgaa 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_b05.g1 MSMg01no050_b05.g1 CHROMAT_FILE:
MSMg01no050_b05.g1 PHD_FILE: MSMg01no050_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:47:54 2005
(695 letters)
>mm_chr8_93638381_93639475
Length = 1095
Score = 1197 bits (619), Expect = 0.0
Identities = 628/631 (99%)
Strand = Plus / Minus
Query: 61 gaaagatgaacagtggtggatcagcaacaaccaaagaaactagagactcacaccaacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 gaaagatgaacagtggtggatcagcaacaaccaaagaaactagagactcacaccaacagc 1036
Query: 121 taacacatgcaggtgtttagttcagcccccatgtgaagcatttttatacattatatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 taacacatgcaggtgtttagttcagcccccatgtgaagcatttttatacattatatcatt 976
Query: 181 tgagcctcccagcagtcagacaactactgtcctcatttcatatatgaggtgactgacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tgagcctcccagcagtcagacaactactgtcctcatttcatatatgaggtgactgacaac 916
Query: 241 tgtacagagagctcagttgacttgtgccttgatactcgtgttggagactgtttaaagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tgtacagagagctcagttgacttgtgccttgatactcgtgttggagactgtttaaagaat 856
Query: 301 tacttgtaagcctagtttatgatggaaaacctcaagtgattcctccccctcgtgagaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tacttgtaagcctagtttatgatggaaaacctcaagtgattcctccccctcgtgagaggc 796
Query: 361 tgaactcagtgaccctgccctactgacctgcgcgtttgcctgcgagtacttcatggcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tgaactcagtgaccctgccctactgacctgcgcgtttgcctgcgagtacttcatggcaaa 736
Query: 421 cgcttggatttgcttcctatagatgttgttgtagaactgaatgaggtctcctcgttcctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cgcttggatttgcttcctatagatgttgttgtagaactgaatgaggtctcctcgttcctc 676
Query: 481 ctcttcaacgtcactgctggcacccgtgagtcgagttggtgtaggagggccactgctggg 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 675 ctcttcaacgtcactgctggcacccgtgagtcgagttggtgtaggaggggcactgctggg 616
Query: 541 ctgtggaactggtagggtgctgtttgacctcctcactgggctggaatctctactggctgc 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 615 ctgtggaactggtagggtgctgtttgacctcatcactgggctggaatctctactggctgc 556
Query: 601 agccaagagaacaaagggtgccggtctggattgtttgaaaacaagacagctcactgcgaa 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 555 agccaagagaacaaagggtgccggtctggattgtttgaaaacaagacagctcactgggaa 496
Query: 661 agggggagaacagctctataaagcactcgtc 691
|||||||||||||||||||||||||||||||
Sbjct: 495 agggggagaacagctctataaagcactcgtc 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
