Query= MSMg01no052_a21.b1 MSMg01no052_a21.b1 CHROMAT_FILE:
MSMg01no052_a21.b1 PHD_FILE: MSMg01no052_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:33 2005
(678 letters)
>mm_chr8_92016129_92017207
Length = 1079
Score = 1299 bits (672), Expect = 0.0
Identities = 675/676 (99%), Gaps = 1/676 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgaaaaagttc-ccagtaacaatgcttagcagttgagtggctttggcttggga 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ggaattctgaaaaagttcaccagtaacaatgcttagcagttgagtggctttggcttggga 770
Query: 63 agggcaaatgaacttctcattcttcattccatttgtctttgtgtccatacacactctctg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agggcaaatgaacttctcattcttcattccatttgtctttgtgtccatacacactctctg 710
Query: 123 tccatagactaagacatcgcatttgccttgggtcagccatcctcttgaagtcagttcttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tccatagactaagacatcgcatttgccttgggtcagccatcctcttgaagtcagttcttt 650
Query: 183 ctcacccaggctctgccatggtctgcacggtctgctgttgcccacactgattctgtggga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctcacccaggctctgccatggtctgcacggtctgctgttgcccacactgattctgtggga 590
Query: 243 tgacagatgtggttgagtgatgtggtcactctttattccttagaaagcacttcaaagggc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgacagatgtggttgagtgatgtggtcactctttattccttagaaagcacttcaaagggc 530
Query: 303 ttagtttgtagctaaatgacagcagggcccagaaagcaggtaggagtggagactaaggct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttagtttgtagctaaatgacagcagggcccagaaagcaggtaggagtggagactaaggct 470
Query: 363 taagctcaggttaaaacttggggccccctgggctccagagaaaccatggaatagatacag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taagctcaggttaaaacttggggccccctgggctccagagaaaccatggaatagatacag 410
Query: 423 actataggatcttatgtgtggcactatgaagctgggggctgggggaggggctgcctgact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 actataggatcttatgtgtggcactatgaagctgggggctgggggaggggctgcctgact 350
Query: 483 caccatgagtgagaccagatagccccagacaacagtcagaatgacacagcaatttactgt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caccatgagtgagaccagatagccccagacaacagtcagaatgacacagcaatttactgt 290
Query: 543 aactgaattaacaacaaagagaggcaaaaactgagatttcacaaccactttggaatttaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aactgaattaacaacaaagagaggcaaaaactgagatttcacaaccactttggaatttaa 230
Query: 603 acacattgtacacttgcttttgaatttgtgtgtgtgtgcatgtgtgtgtatatgtgtgtt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acacattgtacacttgcttttgaatttgtgtgtgtgtgcatgtgtgtgtatatgtgtgtt 170
Query: 663 tgtgtgtgtaagttca 678
||||||||||||||||
Sbjct: 169 tgtgtgtgtaagttca 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1079
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1069
Effective search space: 714092
Effective search space used: 714092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_a21.g1 MSMg01no052_a21.g1 CHROMAT_FILE:
MSMg01no052_a21.g1 PHD_FILE: MSMg01no052_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:33 2005
(649 letters)
>mm_chr8_91937780_91938828
Length = 1049
Score = 1255 bits (649), Expect = 0.0
Identities = 649/649 (100%)
Strand = Plus / Plus
Query: 1 ttcagatggagcatttttctaaatggtcctttgtgtgtgtgcctaagtgtgggtgatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagatggagcatttttctaaatggtcctttgtgtgtgtgcctaagtgtgggtgatgaa 260
Query: 61 tgagatgtggggtacgtagaactgttagtagcacacaggtatgattgattcacacaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagatgtggggtacgtagaactgttagtagcacacaggtatgattgattcacacaggac 320
Query: 121 atacgtgtgacaatagtagtttccagcagagacttgcctaacttcaaagcatctatcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacgtgtgacaatagtagtttccagcagagacttgcctaacttcaaagcatctatcctg 380
Query: 181 gcctacagcttggagatcaactcagtggccagagctgtttcttgtcggcaggctcacgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctacagcttggagatcaactcagtggccagagctgtttcttgtcggcaggctcacgag 440
Query: 241 acatacatttgtattagggaagactgagttctccctgacgttgtttgtcaacatgctgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatacatttgtattagggaagactgagttctccctgacgttgtttgtcaacatgctgac 500
Query: 301 tgtgagtaggagcagctgaagaaatgagggaaatccgacagaaatagccataagtaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgagtaggagcagctgaagaaatgagggaaatccgacagaaatagccataagtaatgt 560
Query: 361 ggagagggagagagtttccagcacagggcttccctaaggaataaaatcaagacctacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagagggagagagtttccagcacagggcttccctaaggaataaaatcaagacctacaaa 620
Query: 421 tatcagatacgcccactgagtgggacaatggccagagaaagagaaatgatagaaattcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcagatacgcccactgagtgggacaatggccagagaaagagaaatgatagaaattcat 680
Query: 481 cacatcatccagtttgagagacttagctgaaggaagtcttgtctcataagagctactatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacatcatccagtttgagagacttagctgaaggaagtcttgtctcataagagctactatt 740
Query: 541 tggcaagagctccttcactcaccaacgtagatttttttcatagtgttttcaacccagtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggcaagagctccttcactcaccaacgtagatttttttcatagtgttttcaacccagtta 800
Query: 601 gagttaccacaactaacagagattccatattcaggacaattaagcataa 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gagttaccacaactaacagagattccatattcaggacaattaagcataa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
