Query= MSMg01no054_a18.b1 MSMg01no054_a18.b1 CHROMAT_FILE:
MSMg01no054_a18.b1 PHD_FILE: MSMg01no054_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:09 2005
(659 letters)
>mm_chr8_8347239_8348297
Length = 1059
Score = 1158 bits (599), Expect = 0.0
Identities = 641/655 (97%)
Strand = Plus / Plus
Query: 5 gaattcgctgtaccccttctgattaattattcaccagcactcagaacttttcatgacact 64
|||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcgctgaatctcttctgattaattattcaccagcactcagaacttttcatgatact 264
Query: 65 ttgtagactccatgaagctctaatgtattctatgcatggtatagaaattaggaaatccat 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtagactccatgaagccctaatgtattctatgcatggtatagaaattaggaaatccat 324
Query: 125 actttttcacaggaaaaaaataaaattacatcttccttttgattccttcagtgacctggt 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actttttcacaggaaaaaattaaaattacatcttccttttgattccttcagtgacctggt 384
Query: 185 aagtgacaaatcacagaagtcacagcataacagtgattgacattgctttcattctcagct 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 aagtgacaaatcacagaagtcacagcataacagtgattgacatcgctttcattctcagct 444
Query: 245 ctctctaatcagtcaccacgcttagcacacagacctctttctaaatctcatgacttggtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 445 ctctctaatcagtcaccacgcttagcacacagacctctttctaaatctcatgacttgctg 504
Query: 305 cattcaccacgaagcacgcataccatgatctccaaaaacatgtatgctctcttaatgatt 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattcaccacgaagcacgcacaccatgatctccaaaaacatgtatgctctcttaatgatt 564
Query: 365 ttcaaggtgactaaaaatatggtctgcttttctttgaaatgctaaaccatttattttaca 424
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 565 ttcaaggtgactaaaaatatggtctgcttttatttgaaatgctaaaccatttattttata 624
Query: 425 catttaggcatattttgggaggaaggtaagaaaacggtacatttaaggaattcatgacag 484
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 625 catttaggaatattttgggaggaaggtaagagaacggtacatttaaggaattcatgacag 684
Query: 485 gaaaatagattaagagtctctgacctgggctttctttagtgactggctgtctgctgaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaaaatagattaagagtctctgacctgggctttctttagtgactggctgtctgctgaata 744
Query: 545 ggctgacatctgcagtcatctttcatggctgatacatgtaccctcagggtgacctgaact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggctgacatctgcagtcatctttcatggctgatacatgtaccctcagggtgacctgaact 804
Query: 605 cagccctttgtgtacccatgagggatgccatttacaacatcccatttcctgcaga 659
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 805 cagccctttgtgtacccatgagggatgccatttacgacatcccatttcctgcaga 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_a18.g1 MSMg01no054_a18.g1 CHROMAT_FILE:
MSMg01no054_a18.g1 PHD_FILE: MSMg01no054_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:09 2005
(619 letters)
>mm_chr8_8407439_8408457
Length = 1019
Score = 1174 bits (607), Expect = 0.0
Identities = 616/619 (99%)
Strand = Plus / Minus
Query: 1 tgagaaaaatgtatttgtctaggtcaactctcagcttactttgataattcctgtcattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 819 tgagaaaaatgtatttgtctaggtcaactctcagcttactttgataattcctgtcgttgt 760
Query: 61 atgtgagagacttttcattttcttctttggtaagttcagtgctttagggcaagttggggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 atgtgagagacttttcattttcttctttggtaagttcagtgctttagggcaagttggggc 700
Query: 121 aggattcttggtgttctggtgtctttatgagttttcatgggttacactggcgagccgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aggattcttggtgttctggtgtctttatgagttttcatgggttacactggcgagccgtca 640
Query: 181 gaagactcagtaaaacaattggcaggaaaaattaggatttttcagggagattagtgacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gaagactcagtaaaacaattggcaggaaaaattaggatttttcagggagattagtgacca 580
Query: 241 ctttgattcttttccatactatgcctctggtcttaataaaaatcaaatggaaacatcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ctttgattcttttccatactatgcctctggtcttaataaaaatcaaatggaaacatcaag 520
Query: 301 cagagatgtagctttggcactggcagccttgtgccctggccagtagtgctgctgtagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cagagatgtagctttggcactggcagccttgtgccctggccagtagtgctgctgtagatc 460
Query: 361 aaatacttcacttctttaatgattgacaaattcactcattgattcatttaacaagccctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaatacttcacttctttaatgattgacaaattcactcattgattcatttaacaagccctt 400
Query: 421 ctacagtgttttaggcatgaaaaagaaaaccggtaactgtcatctagcatctatctcatg 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ctacagtgttctaggcatgaaaaagaaaaccggtaactgtcatctagcatctatctcatg 340
Query: 481 gcttagaaggaagaagggatgagatattccccacggtaaagatggagcaaactgagcaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gcttagaaggaagaagggatgagatattccccacggtaaagatggagcaaactgagcaca 280
Query: 541 gtagtgagtcaatggggtggctgctgtccctgaacagggaggattttggtggaacaatag 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtagtgagtcaatggggtagctgctgtccctgaacagggaggattttggtggaacaatag 220
Query: 601 tagtttcctgtgttgactg 619
|||||||||||||||||||
Sbjct: 219 tagtttcctgtgttgactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
