Query= MSMg01no055_a07.b1 MSMg01no055_a07.b1 CHROMAT_FILE:
MSMg01no055_a07.b1 PHD_FILE: MSMg01no055_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:20 2005
(275 letters)
>mm_chr8_60425027_60425700
Length = 674
Score = 453 bits (234), Expect = e-132
Identities = 261/270 (96%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttggatccccccctcgtaggtcaaatgaacgccagatatgtgcttgtcaatc 64
||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcacttggatcaaccccttgtaggtcaaatgaatgccagatatgtgcttgtcaatc 264
Query: 65 aacaacctgtttccctccctacctgctgattcctgagtgtggaatctattcctcattctt 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaacctgtttccctccccacctgctgattcctgagtgtggaatctattcctcattctt 324
Query: 125 tgctcctgggacaatcctaacaactaccaagaaaatggccagaaaagtttcaaacataca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgctcctgggacaatcctaacaactaccaagaaaatggccagaaaagtttcaaacataca 384
Query: 185 cgcaagaaattgtttttttctctgcttctgctctctttctcccttcaggttcgtggccag 244
| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 385 cccaagaaattgtttttttctctgcttctgctctctttctcccttcaggctcatggccag 444
Query: 245 cagcctccagggagaaaagggtgcagggtg 274
||||||||||||||||| ||||||||||||
Sbjct: 445 cagcctccagggagaaa-gggtgcagggtg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 674
Length adjustment: 9
Effective length of query: 266
Effective length of database: 665
Effective search space: 176890
Effective search space used: 176890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_a07.g1 MSMg01no055_a07.g1 CHROMAT_FILE:
MSMg01no055_a07.g1 PHD_FILE: MSMg01no055_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:20 2005
(247 letters)
>mm_chr8_60587903_60588549
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 attattggtataattatgtaaatctatgatcacattactgtctgttttctctataaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 attattggtataattatgtaaatctatgatcacattactgtctgttttctctataaaccc 388
Query: 61 atgggttcatgcaccaccctgcttatttgagccagtattgcataattgaaagcagattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgggttcatgcaccaccctgcttatttgagccagtattgcataattgaaagcagattta 328
Query: 121 gcacctggggtttgggggcttaggtgaatggactataaacatgaatcattttagggtggt 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 327 gcacctggggtttgggggcttaggtgaatggactataaatatgaatcattttagggtggt 268
Query: 181 tcactattatatccaaatttcagtaatgctataaaacacaattctaaatattttcctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcactattatatccaaatttcagtaatgctataaaacacaattctaaatattttcctcaa 208
Query: 241 tatgcat 247
|||||||
Sbjct: 207 tatgcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
