CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CACCCTGTGTTACATTAGCCCCAGGCCTGTCTGTCCCAAAGGGGATTCCC
CCACCCCACCCCCGCCCCCTTCCTATCTTACCAAAACACAGGCAACCTGG
ATCTGAGGGCTATGTCATTCTGCAGAGTCTAGGCTAATCTAGCAGAAATG
CTTTGAGTCAACAAGTCCTTACTCCTACCCACCTCTGAGAGCCTGCGCTT
TTCCTCAAAGCTAAACAAAAGAGTACCTCCTGCCAACATTAAGGCTGAGC
GAATGACATAAACTCCCTGTCTTGTCTTAAGAACTTTTAAGAACTGCTTA
AATTCTTGATCTGTGTTCTGCTGTTGCTTCCTCAGTTTCAGGGTGGTGTG
GGGGAGGAAAGCATAAAACAAAGGGGTGCACTTAGGAAGCAGGAGGCACT
TGTACCCATCCTTGCCCAGGGGATATGCCTTTACTTGATTTTCTAAAGAG
ACTGAGCGTAAGGCTAGGGGCTTGCCAGCTTCAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGATACCCTCCCTC
CTTTTTTCCCCTTCCCTTCTCCTTCCTCTTCTTTCGCCCCCTCTTCTTTC
CCTATTTCCCCATCTCCCTCCCCTCCCTTTATTTCTTTATTTTTTATCCT
TCTTTTTCCCCCTTCTTTTCCCTT

GATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTTGCCTAATGGAGTATCTCAGAGACTGTGT
CTCCATCTGCAATACTGCAAACAACAGAGGCAAATAGCAATTGCTCAGCC
CTCAGCGTCTCCTCTGACATATGGGGATGATGTGAACAGGGAAACCTTGC
ACCTAAGCCTACCTCTTAGGCTATGGGACCTGTGAGCTAGTTCAATTGGC
CATGCCCTATACCCTGGCTCTCAGTTCTTCTTCATAGCTAGCACACACTA
ATTCCAGGGTCCACTCCCTAACTACCCATGACCCTCAATAAAAGGAGGCT
GCCAGAGATATTCTGCCGCCAAAGGCGCAGTTTGAGGCAGTTATTCAGAA
TACCCAAGCACTATCTTTGCCAGTTGGTTTTGTAGCCATAGAGACAACAA
GTGATTTTGTCAGGAGGAGATGATGACTTGGATGAAGGAGGCTTGCTCCA
ACCTGGACACACCTGTGGTGCCTTGAGAACATAATCTCGCCTCTACCCAG
ATAGAGCTGCTGGGCCAGCACCTGTGCTCTTAACCTTGAAGCCTATAGAG
TATAAGGTCTTTGGCTGTAGTAGTTGTTTGTTTTTAACCACTACTTTAAA
ATAAAGCCTGAGGTCACTATGTTGAATGTGCCTGGGTCAAAAAGAGGCAA
TGCCTGTTAC

Query= MSMg01no056_b19.b1 MSMg01no056_b19.b1 CHROMAT_FILE:
MSMg01no056_b19.b1 PHD_FILE: MSMg01no056_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:41 2005
         (535 letters)



>mm_chr8_116193082_116194017
          Length = 936

 Score =  980 bits (507), Expect = 0.0
 Identities = 525/531 (98%), Gaps = 3/531 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattcaccctgt-gt-tacattagccccaggcctgtctgtcccaaaggggattccccca 64
           ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaattcaccctgtggtata-attagccccaggcctgtctgtcccaaaggggattccccca 636

                                                                       
Query: 65  ccccacccccgcccccttcctatcttaccaaaacacaggcaacctggatctgagggctat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ccccacccccgcccccttcctatcttaccaaaacacaggcaacctggatctgagggctat 576

                                                                       
Query: 125 gtcattctgcagagtctaggctaatctagcagaaatgctttgagtcaacaagtccttact 184
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtcattctgcagagtccaggctaatctagcagaaatgctttgagtcaacaagtccttact 516

                                                                       
Query: 185 cctacccacctctgagagcctgcgcttttcctcaaagctaaacaaaagagtacctcctgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cctacccacctctgagagcctgcgcttttcctcaaagctaaacaaaagagtacctcctgc 456

                                                                       
Query: 245 caacattaaggctgagcgaatgacataaactccctgtcttgtcttaagaacttttaagaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caacattaaggctgagcgaatgacataaactccctgtcttgtcttaagaacttttaagaa 396

                                                                       
Query: 305 ctgcttaaattcttgatctgtgttctgctgttgcttcctcagtttcagggtggtgtgggg 364
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 395 ctgcttaaattcttgatctgtgttctgctgttgcttcctcagtttcggggtggtgtgggg 336

                                                                       
Query: 365 gaggaaagcataaaacaaaggggtgcacttaggaagcaggaggcacttgtacccatcctt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaggaaagcataaaacaaaggggtgcacttaggaagcaggaggcacttgtacccatcctt 276

                                                                       
Query: 425 gcccaggggatatgcctttacttgattttctaaagagactgagcgtaaggctaggggctt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcccaggggatatgcctttacttgattttctaaagagactgagcgtaaggctaggggctt 216

                                                              
Query: 485 gccagcttcagagagagagagagagagagagagagagagagagagagagag 535
           ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 215 gccagcttcagagagagagagagagagagagagagggagagagagagagag 165


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 936
Length adjustment: 10
Effective length of query: 525
Effective length of database: 926
Effective search space:   486150
Effective search space used:   486150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)