Query= MSMg01no056_d14.b1 MSMg01no056_d14.b1 CHROMAT_FILE:
MSMg01no056_d14.b1 PHD_FILE: MSMg01no056_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:50 2005
(114 letters)
>mm_chr8_128320319_128320832
Length = 514
Score = 213 bits (110), Expect = 3e-60
Identities = 113/114 (99%)
Strand = Plus / Minus
Query: 1 tgatcatgctggtcacactggtcacactgatcatgctggtcacattgatcacactggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgatcatgctggtcacactggtcacactgatcatgctggtcacattgatcacactggtca 255
Query: 61 cattaatcatacttgtcacactggtcacattgattatactggtcacactggtca 114
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 254 cattaatcatacttgtcatactggtcacattgattatactggtcacactggtca 201
Score = 166 bits (86), Expect = 3e-46
Identities = 107/114 (93%)
Strand = Plus / Minus
Query: 1 tgatcatgctggtcacactggtcacactgatcatgctggtcacattgatcacactggtca 60
|||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 143 tgatcatgctggtcacactggtcacattaatcatgttggtcacattgatcacactggtca 84
Query: 61 cattaatcatacttgtcacactggtcacattgattatactggtcacactggtca 114
||||||||| |||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 83 cattaatcacacttgtcacactggtcacattgatcatgctggtcacattggtca 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 2
Length of query: 114
Length of database: 514
Length adjustment: 8
Effective length of query: 106
Effective length of database: 506
Effective search space: 53636
Effective search space used: 53636
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_d14.g1 MSMg01no056_d14.g1 CHROMAT_FILE:
MSMg01no056_d14.g1 PHD_FILE: MSMg01no056_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:50 2005
(124 letters)
>mm_chr8_128160602_128161125
Length = 524
Score = 217 bits (112), Expect = 2e-61
Identities = 121/124 (97%)
Strand = Plus / Plus
Query: 1 gtgatcaagaagctcaacactcaccagataccttcctgcaccagtctggtgacactgaaa 60
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 201 gtgatcaagaagctcaacactcagcagagaccttcctgcaccagtctggtgacactgaaa 260
Query: 61 accatacatcacctgctcacctataccctgaaccccacaggatgtcccaaggatggaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 accatacatcacctgctcacctataccctgaaccccacaggatgtcccaaggatgggaaa 320
Query: 121 ctaa 124
||||
Sbjct: 321 ctaa 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
