NTTATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTATCAAATTCCACCTTGTGCCATTTGTTCCTTCCATGAATT
GAAGCCAGAGGTCTCTGTGCTCTAACTAATCAACAGGAAAGGGTAAGAAG
CCTGAGCTGCAGGACCTTGTTGAGCCAGAGCAGTGTCCATGATAGCAGCT
ATAGAGCTGTGATGAGATTCTCCCTTCCCTTATCCCAGGCACAGAGACAT
GGACCATAGTAGCCAGGTAATTTTAATATTGAAGAAAGCTTTATGGATTC
TCACACACTTTCCCTCACTGTGTATCAGTAAGATATCTGTTGCTGTGTTT
AGATATTCCTCTGCCCACCCCCCCTCCCCCCCAAAAAAACAATGAAAGAA
ATAGGGGTTTATTTGGTTGAAAATATAGTCCATCATGGTAGGGAAGCTAG
GGCTACAGGAGCTTAAAACAACTGGTCTTATGGCATCTTCAGTAATGAAT
GCTTATGCTAAGCTTACTTTCTTCTTTTCATACAGCCCAGGATACCAGCT
TAGGGAATTGTGTCACCCCCTGTAGACAGGACTTCTCCCTCAATTAATCT
AACAAGATAATCCTACACAGGCATTCAAAAAGCTCCTTACAGAGGTGATT
CTCAAGCTCACTGAATTAACAATTGAGAATAGCCATCACACTTGAT

NCCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXGGCTAGACTACTTTTAGCATGTTCTAATGGAACTAT
TTTGTAGAAGATTAAGATGGCCCTTCTTCCCACAGGACTGAGAGTAGAGT
TTTGCAACTAAATGTGGATTCTTCTTGTTGCCTGTATTTCTCAGAGTATG
GGAGCAAGGATATGAAAGGAAAATCTTGTTGGTTTATTTGGGGAGCTCTT
ACTCTTTTCTATATTTTGGTTGGATAGTCTATTCAGGAGTCAAAAGATGG
GACTCATAGTTATAGATCTTACACTCNCTCTCTCTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGCGCGCGTGTGTGTGTGTTCACCCCCCCACATTCT
CCTTTTCCCCTTCCCTCTCCCCCTCATTTTTTTTTCTACTCTCTTTTTCT
CTCCCCCCCCCTTCCTCCCCTTTGTCTCTCATCTTTTTTTTATTTTTCCT
CACATCTCTAATTCCCTCCTTTCTCCTCTCATTTTTTGACAATATCAAAT
CATATCTATACCTATCCCCCTATTGTTGTTTTTTATTTCAATCTTCTACC
TGTCTTCCCTTTTGTTTATAATTTTATTCCCCCTCCCCCTTTTTCCCGCT
TTTCCTCCTTATCCCACCCAGACAACCTCTCATTTTCTTCTTTTTTTCTC
TTTCCAATTATTACATTTTTCCC

Query= MSMg01no057_e03.b1 MSMg01no057_e03.b1 CHROMAT_FILE:
MSMg01no057_e03.b1 PHD_FILE: MSMg01no057_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:09 2005
         (642 letters)



>mm_chr8_55136284_55137325
          Length = 1042

 Score = 1197 bits (619), Expect = 0.0
 Identities = 634/639 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttatcaaattccaccttgtgccatttgttccttccatgaattgaagccagagg 63
           ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttcaaatttcaccttgtgccatttgttccttccatgaattgaagccagagg 263

                                                                       
Query: 64  tctctgtgctctaactaatcaacaggaaagggtaagaagcctgagctgcaggaccttgtt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctctgtgctctaactaatcaacaggaaagggtaagaagcctgagctgcaggaccttgtt 323

                                                                       
Query: 124 gagccagagcagtgtccatgatagcagctatagagctgtgatgagattctcccttccctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagccagagcagtgtccatgatagcagctatagagctgtgatgagattctcccttccctt 383

                                                                       
Query: 184 atcccaggcacagagacatggaccatagtagccaggtaattttaatattgaagaaagctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atcccaggcacagagacatggaccatagtagccaggtaattttaatattgaagaaagctt 443

                                                                       
Query: 244 tatggattctcacacactttccctcactgtgtatcagtaagatatctgttgctgtgttta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatggattctcacacactttccctcactgtgtatcagtaagatatctgttgctgtgttta 503

                                                                       
Query: 304 gatattcctctgcccaccccccctcccccccaaaaaaacaatgaaagaaataggggttta 363
           |||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gatattcctccgcccgcctcccctcccccccaaaaaaacaatgaaagaaataggggttta 563

                                                                       
Query: 364 tttggttgaaaatatagtccatcatggtagggaagctagggctacaggagcttaaaacaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttggttgaaaatatagtccatcatggtagggaagctagggctacaggagcttaaaacaa 623

                                                                       
Query: 424 ctggtcttatggcatcttcagtaatgaatgcttatgctaagcttactttcttcttttcat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctggtcttatggcatcttcagtaatgaatgcttatgctaagcttactttcttcttttcat 683

                                                                       
Query: 484 acagcccaggataccagcttagggaattgtgtcaccccctgtagacaggacttctccctc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acagcccaggataccagcttagggaattgtgtcaccccctgtagacaggacttctccctc 743

                                                                       
Query: 544 aattaatctaacaagataatcctacacaggcattcaaaaagctccttacagaggtgattc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aattaatctaacaagataatcctacacaggcattcaaaaagctccttacagaggtgattc 803

                                                  
Query: 604 tcaagctcactgaattaacaattgagaatagccatcaca 642
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tcaagctcactgaattaacaattgagaatagccatcaca 842


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no057_e03.g1 MSMg01no057_e03.g1 CHROMAT_FILE:
MSMg01no057_e03.g1 PHD_FILE: MSMg01no057_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:09 2005
         (196 letters)



>mm_chr8_55293286_55293881
          Length = 596

 Score =  337 bits (174), Expect = 4e-97
 Identities = 189/194 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcccacaggactgagagtagagttttgcaactaaatgtggattcttcttgttgcctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cttcccacaggactgagagtagagttttgcaactaaatgtggattcttcttgttgcctgt 335

                                                                       
Query: 61  atttctcagagtatgggagcaaggatatgaaaggaaaatcttgttggtttatttggggag 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 334 atttctcagagtatgggagcaaggttatgaaaggaaaatcttgttggtttatttggggag 275

                                                                       
Query: 121 ctcttactcttttctatattttggttggatagtctattcaggagtcaaaagatgggactc 180
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 274 ctcttactccactctatattttggttggatagtctattcaggagtcaaaagatgggactt 215

                         
Query: 181 atagttatagatct 194
           ||||||||||||||
Sbjct: 214 atagttatagatct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space:   110544
Effective search space used:   110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)