Query= MSMg01no057_o10.b1 MSMg01no057_o10.b1 CHROMAT_FILE:
MSMg01no057_o10.b1 PHD_FILE: MSMg01no057_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:00 2005
(464 letters)
>mm_chr8_114641393_114642257
Length = 865
Score = 816 bits (422), Expect = 0.0
Identities = 455/466 (97%), Gaps = 2/466 (0%)
Strand = Plus / Plus
Query: 1 ctatcgaca-acacataacactaaagacatgagatctccgaggaatgagggtaaatatga 59
||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 200 ctatcgacacacacatagcactaaagacatgagatctccgaggaaggagggtaaatatga 259
Query: 60 actttgaaaatgtccttggacaaagccgggaggcctacagtgttcagagatctaagcagc 119
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 260 acgttgaaaatgtccttggacaaagccgggaggcctacagtgttcagaggtctaagcagc 319
Query: 120 aatgcctatggacatgagtgagcaatgactgggcgtggggggaggaatgtgggtgatctg 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatgcctgtggacatgagtgagcaatgactgggcgtggggggaggaatgtgggtgatctg 379
Query: 180 gactctgggtaaagagtgtgacaaatgtccctgttagaccagggcaagagacaacagatt 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 gactctgggtaaagagtgtgacaaatgtccctgttagaccagggcgagagacaacagatt 439
Query: 240 atgacaggaatgaagagaagaacgccttctaactttaatctttctctagctggcgatgag 299
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 440 atgacaggaatgaagagaagaacgtcttcttactttaatctttctctagctggcgatgag 499
Query: 300 atgcttctgcctgtctgactttgcaaatcctagaaattttagactctctctctattct-t 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 500 atgcttctgcctgtctgactttgcaaatcctagaaattttagactctctctctattctct 559
Query: 359 tttattcctgtctgcaaatgaaaattctttccagaactgatgtctcctgaagtatcttgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttattcctgtctgcaaatgaaaattctttccagaactgatgtctcctgaagtatcttgt 619
Query: 419 cgaatccatctagtaataaccttgtacagctagcattttattttct 464
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 620 cgaatccatctagtaataagcttgtacagctagcattttattttct 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_o10.g1 MSMg01no057_o10.g1 CHROMAT_FILE:
MSMg01no057_o10.g1 PHD_FILE: MSMg01no057_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:00 2005
(328 letters)
>mm_chr8_114762413_114763141
Length = 729
Score = 590 bits (305), Expect = e-173
Identities = 317/321 (98%), Gaps = 1/321 (0%)
Strand = Plus / Minus
Query: 1 ggggccaggagataaaagaaacccaggtagatcgtgatttccagtttcctgtctc-aaaa 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 521 ggggccaggagataaaagaaacccaggtagatcgtgatttccagtttgctgtctcaaaaa 462
Query: 60 gcttagcggatgatatttgcataacatagatgggcgatttgtgaggaagccaagaaacag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcttagcggatgatatttgcataacatagatgggcgatttgtgaggaagccaagaaacag 402
Query: 120 caggcaaagagcacagttcccattttagacactattcagactctctgtggaacgtcacgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caggcaaagagcacagttcccattttagacactattcagactctctgtggaacgtcacgc 342
Query: 180 tgagatgacaagtgaatttggcccggaactcaagggctcagtgcaaagacggtgatttgg 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 341 tgagatgacaagtgaatttggcccggaactcaagggctcagtgctaagacggtgatttgg 282
Query: 240 gaatcaggaacatgtagatgtgcgttacaccccagaaaatcaaattgcctaaaaagaggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gaatcaggaacatgtagatgtgcgttacaccccagaaaatcaaattgcctaaaaagaggc 222
Query: 300 catcaaagaggaagaggaaga 320
|||||||||| ||||||||||
Sbjct: 221 catcaaagagaaagaggaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 729
Length adjustment: 9
Effective length of query: 319
Effective length of database: 720
Effective search space: 229680
Effective search space used: 229680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
