Query= MSMg01no063_d12.b1 MSMg01no063_d12.b1 CHROMAT_FILE:
MSMg01no063_d12.b1 PHD_FILE: MSMg01no063_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:30 2005
(325 letters)
>mm_chr8_110870726_110871451
Length = 726
Score = 580 bits (300), Expect = e-170
Identities = 309/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 14 ggaa-tcacctcacagcggctcttcttggatccctggcgaaagtaggttaggggcagata 72
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ggaattcacctcacagcggctcttcttggatccctggcgaaagtaggttaggggcagata 273
Query: 73 gcaatcaagagggccattttctgtgtcaaaaaaacaacctcttagtcagtcaggaatgaa 132
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcaatcaagaggggcattttctgtgtcaaaaaaacaacctcttagtcagtcaggaatgaa 333
Query: 133 gccgaggacatagacaagtaactctaagcctccagacagagaccttcctgggtaactgta 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gccgaggacatagacaagtaactctaagcctccagacagagaccttcctgggtaactgta 393
Query: 193 aagcaacagaaatgaagaggaagagacaatagctactcaaaatgcttgtccagctagcct 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aagcaacagaaatgaagaggaagagacaatagctactcaaaatgcttgtccagctagcct 453
Query: 253 gaggacctggactcaaccccccaggatttgagtttaaaataaaacaaaacaaacaaacaa 312
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gaggacctggactcaacaccccaggatttgagtttaaaataaaacaaaacaaacaaacaa 513
Query: 313 acaaaacaaaac 324
||||||||||||
Sbjct: 514 acaaaacaaaac 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_d12.g1 MSMg01no063_d12.g1 CHROMAT_FILE:
MSMg01no063_d12.g1 PHD_FILE: MSMg01no063_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:30 2005
(287 letters)
>mm_chr8_110938247_110938933
Length = 687
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Minus
Query: 1 tcacttccttcatggctccataaatgtattatttttgagattaaatgaagatacagtaag 60
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcacttctttcatggttccataaatgtattatttttgagattaaatgaagatacagtaag 428
Query: 61 gctcatacatggtaacatgtggacaaatgtttcaagcctcttgaaccaaagggggttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gctcatacatggtaacatgtggacaaatgtttcaagcctcttgaaccaaagggggttgct 368
Query: 121 tctgatttatatttttgtccttggaagttttttgttgttatcagatgcactggttcatga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 367 tctgatttatatttttgtccttggaagttttttgttgttatcagatgcactggttcgtga 308
Query: 181 atctgactgcatttcatcatagcacagaacccagtggtattagccatgaccagttcatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atctgactgcatttcatcatagcacagaacccagtggtattagccatgaccagttcatgg 248
Query: 241 ctagtcttagtgtccctttcccttttcatcactgtgaccaaatactt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ctagtcttagtgtccctttcccttttcatcactgtgaccaaatactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
