Query= MSMg01no065_b23.b1 MSMg01no065_b23.b1 CHROMAT_FILE:
MSMg01no065_b23.b1 PHD_FILE: MSMg01no065_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:32 2005
(155 letters)
>mm_chr8_46551436_46551990
Length = 555
Score = 261 bits (135), Expect = 1e-74
Identities = 150/155 (96%)
Strand = Plus / Plus
Query: 1 gacacagtctccacgagtcaagcaggtgtcaaaactagcctcgtgtattgcaggaactgg 60
|||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacacaatctccgtgagtcaggcaggtgtcaaaactagcctcgtgtattgcaggaactgg 260
Query: 61 gcaaacctttataccctcttccagcatcttattggctcccaagtagccagatgtgggact 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaacctttataacctcttccagcatcttattggctcccaagtagccagatgtgggact 320
Query: 121 ttttctcattggatccctccattacctgatctagt 155
|||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttctcattggatccctccattacctgatctagt 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_b23.g1 MSMg01no065_b23.g1 CHROMAT_FILE:
MSMg01no065_b23.g1 PHD_FILE: MSMg01no065_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:32 2005
(529 letters)
>mm_chr8_46722411_46723346
Length = 936
Score = 920 bits (476), Expect = 0.0
Identities = 519/536 (96%), Gaps = 7/536 (1%)
Strand = Plus / Minus
Query: 1 tttgatcagtgggaagttgagttttcaaatgctagtcacccaaggagtcatgctatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tttgatcagtgggaagttgagttttcaaatgctagtcacccaaggagtcatgctatgttt 677
Query: 61 gttggccagataaaatattctcccttgctctgggatgcatcagctagaacgacagtagat 120
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 676 gttggccagataaaatattctcccttgctccgggatgcatcatctagaacgacagtagat 617
Query: 121 ttcttggaaatgatttgcttttagttagaaatggaaacacttggctttcaagtcaacact 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 616 ttcttggaaatgatttgcttttagttagaaatggaaacacttgactttcaagtcaacact 557
Query: 181 cttcttagttttttctgaccttgaaagttccttcggttgggtgacccaaaggatggcaca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cttcttagttctttctgaccttgaaagttccttcggttgggtgacccaaaggatggcaca 497
Query: 241 cctgcctgcatgctgaagcccctccggatcctgtcttccctgcgggtcttttctgtactg 300
||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 496 cctgcctgcatgctgaagcccctccggatcctgtcttacttgtgggtcttttctgtactg 437
Query: 301 tggacttgcaggacctctcctcacagactggagtagaagccgagcgcaataaaacactga 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 436 tggacttgcaggacctctcctcacagactggagtagaagccgagtgcaataaaacactga 377
Query: 361 ggagtgtgggaaccagcagtccacagacagaacatcctctaggagtcaagttgatgatcc 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggagtgtgggaaccagtagtccacagacagaacatcctctaggagtcaagttgatgatcc 317
Query: 421 taatctttgcatttccaacagctatgaaaataaatatccgagttccaaagggaggaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 taatctttgcatttccaacagctatgaaaataaatatccgagttccaaagggaggaaaca 257
Query: 481 agagttctgagggcatgttttttttt-tt-tta-----atttctttcaaaggaaga 529
||||||||||||||||||||||| || || ||| ||||||||||||||||||
Sbjct: 256 agagttctgagggcatgttttttattattattattattatttctttcaaaggaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 936
Length adjustment: 10
Effective length of query: 519
Effective length of database: 926
Effective search space: 480594
Effective search space used: 480594
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
