Query= MSMg01no072_k01.b1 MSMg01no072_k01.b1 CHROMAT_FILE:
MSMg01no072_k01.b1 PHD_FILE: MSMg01no072_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
(436 letters)
>mm_chr8_3350532_3351369
Length = 838
Score = 791 bits (409), Expect = 0.0
Identities = 428/435 (98%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 4 gaattcttttatctcactacatttttatttattcaatgtccgtgtgtgtgcctctgcatt 63
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 204 gaattcttttatctcattacatttttatttattcaatgtccgtgtgtgtggctctgcatt 263
Query: 64 gcacagtacacctgtagaggtcagaggacaacttgcagcagtcatttctctccttctact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcacagtacacctgtagaggtcagaggacaacttgcagcagtcatttctctccttctact 323
Query: 124 aacctgggatcaggaatcaaattgaggtaagcaggctcctttatccacttagccataaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacctgggatcaggaatcaaattgaggtaagcaggctcctttatccacttagccataaca 383
Query: 184 caggcccaacattccagaagattaatgatccactcctgggagccaagacaagccagagaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 caggcccaacattccagaagattaatgatccactcctgggagccaagacaagccggagaa 443
Query: 244 gtctgcaggggtctggcgagtctgagaggctagatgtggttgagtgt--gtgtgagatgc 301
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 gtctgcaggggtctggcgagtctgagaggctagatgtggttgagtgtttgtgtgagatgc 503
Query: 302 tcttgtgtctccagattggcgctgtgtaaacatgtgtctcggaggtctccgtctcctttg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcttgtgtctccagattggcgctgtgtaaacatgtgtctcggaggtctccgtctcctttg 563
Query: 362 gggtggtttgaataagaaacaccacccataggcttgtgtatttgaacatttggtccctag 421
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 gggtggtttgaataggaaacaccacccataggcttgtgtatttgaacatttggtccccag 623
Query: 422 ttggtggtactgttt 436
|||||||||||||||
Sbjct: 624 ttggtggtactgttt 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 838
Length adjustment: 9
Effective length of query: 427
Effective length of database: 829
Effective search space: 353983
Effective search space used: 353983
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_k01.g1 MSMg01no072_k01.g1 CHROMAT_FILE:
MSMg01no072_k01.g1 PHD_FILE: MSMg01no072_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
(159 letters)
>mm_chr8_3494393_3494951
Length = 559
Score = 300 bits (155), Expect = 3e-86
Identities = 158/159 (99%)
Strand = Plus / Minus
Query: 1 gtagtggtaaggatgggaagttaaggatacctagtagtccttctctgtcacggtgaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtagtggtaaggatgggaagttaaggatacctagtagtccttctctgtcacggtgaaaac 300
Query: 61 tgcagggctccttgtttgcttccaggaaagaattctagacctctctagaattctagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgcagggctccttgtttgcttccaggaaagaattctagacctctctagaattctagcttg 240
Query: 121 agtgagatatgttctgtcttacaccagaggacagggagt 159
||||||||||||||||||||| |||||||||||||||||
Sbjct: 239 agtgagatatgttctgtcttaaaccagaggacagggagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
