ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAACTGATGCTTACCGAATGGCTGAGAAGCACCTAAAAAAAAT
GTTCGACATCCTTTAGTCATCAGGAAAATGCAAATCAAAACAAGCCTGAG
ATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAACCTCAGATGAGA
GCAGATGGTGGCAGGGATGTGAATAAAGAGAAACACTCCTCCATTGTTAG
TGGGATTGCAAGCTGGTATAACCAATCTGGAAATCAGTCTGGAGGTTCCT
CAGAAAACTGGACATAGTACTAGCTGAGGACCCAGCTATACCACTCCTGG
GCATATATCCCAAAGATGCTCCAACATCTAACAAGAACTCATGCTCCACT
ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGTCCCACAATAGAGGAATGGATACAGAAAATGTGGTGCATTTATACAC
TATATACTACTCAGCTATTAAAAACAATGACTTCATGAAATTCTTAGGCA
AATGGATGGAACTAGAAAATGTTGTCCTGAGTGAGATAGCCCAATCACAA
AAGTACACACATGGTATGCACTTACTGATAAGTGGATATTAGACCAAATG
CTCTGAATACCCTAAATACAGTTCACAGACCATGTGTAGCT

NTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTAAAGAGTTAGAAATACAGAAG
AAATCCAAACTGAAGTAAAGCTGAAAATTAAAAATACAGTAAATCAACTA
AAATACTCAGTAGACAGCTTCACCAAAAGAACTGATCACATAGAAGGAAG
CTTACCAGTGTATGAAGACTACCACAATGAATACTATCTTCTATGGCTTC
TCAAGTTATTGTTTTATACTGTGTTCACAATTGCTTAAAACTGCAGAGTT
AATTTTCTTGGCAAAGTCACTGAATTTATGACAATGTTCACTGTGTACCA
CTGAATTGGATTGTTAAATCAAAGAAAATGGTAACTTTAAAAGATCTAAC
CAATTGACCAATCACTTAGAGCCAAGGACTAACATATGGACTCCACAGGT
TTGTTTGCTGTTATTGTTGTGTGTTATTTGTTTATTTGGTGTGTGTGTGT
ATGTGATTTCACTTGGTCATAATTTAGTGTTTTGTTTTTCTTTTGTGTGT
GGTTTTGTTTTGGTTTGGGAGGTTTTGGGTTTATTTGGTTTTTGCTCCCC
CCCTCCCCCCTCTTCTTTTCTTTCTTCCACTCCCCACTTTATCTTCTTTC
TCTCTCTTCCCTTCCCTCATCTTCCCCCTTCCTTCCCTCTTTA

Query= MSMg01no072_k02.g1 MSMg01no072_k02.g1 CHROMAT_FILE:
MSMg01no072_k02.g1 PHD_FILE: MSMg01no072_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:26 2005
         (505 letters)



>mm_chr8_100091209_100092118
          Length = 910

 Score =  955 bits (494), Expect = 0.0
 Identities = 504/510 (98%), Gaps = 5/510 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attaaagagttagaaatacagaagaaatccaaactgaagtaaagctgaaaattaaaaata 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 attaaagagttagaaatacagaagaaatccaaactgaagtgaagctgaaaattaaaaata 260

                                                                       
Query: 61  cagtaaatcaactaaaatactcagtagacagcttcaccaaaagaactgatcacatagaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtaaatcaactaaaatactcagtagacagcttcaccaaaagaactgatcacatagaag 320

                                                                       
Query: 121 gaagcttaccagtgtatgaagactaccacaatgaatactatcttctatggcttctcaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagcttaccagtgtatgaagactaccacaatgaatactatcttctatggcttctcaagt 380

                                                                       
Query: 181 tattgttttatactgtgttcacaattgcttaaaactgcagagttaattttcttggcaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattgttttatactgtgttcacaattgcttaaaactgcagagttaattttcttggcaaag 440

                                                                       
Query: 241 tcactgaatttatgacaatgttcactgtgtaccactgaattggattgttaaatcaaagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcactgaatttatgacaatgttcactgtgtaccactgaattggattgttaaatcaaagaa 500

                                                                       
Query: 301 aatggtaactttaaaagatctaaccaattgaccaatcacttagagccaaggactaacata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatggtaactttaaaagatctaaccaattgaccaatcacttagagccaaggactaacata 560

                                                                       
Query: 361 tggactccacaggtttgtttgctgttattgttgtgtgttatttgtttatttggtgtgtgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggactccacaggtttgtttgctgttattgttgtgtgttatttgtttatttggtgtgtgt 620

                                                                       
Query: 421 gtgtatgtgatttcacttggtcataatttagtgtttt-----gtttttcttttgtgtgtg 475
           |||||||||||||||||||||||||||||||||||||     ||||||||||||||||||
Sbjct: 621 gtgtatgtgatttcacttggtcataatttagtgttttattttgtttttcttttgtgtgtg 680

                                         
Query: 476 gttttgttttggtttgggaggttttgggtt 505
           ||||||||||||||||||||||||||||||
Sbjct: 681 gttttgttttggtttgggaggttttgggtt 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 910
Length adjustment: 10
Effective length of query: 495
Effective length of database: 900
Effective search space:   445500
Effective search space used:   445500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)