Query= MSMg01no075_j12.b1 MSMg01no075_j12.b1 CHROMAT_FILE:
MSMg01no075_j12.b1 PHD_FILE: MSMg01no075_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:17 2005
(416 letters)
>mm_chr8_11176411_11177226
Length = 816
Score = 700 bits (362), Expect = 0.0
Identities = 401/422 (95%), Gaps = 15/422 (3%)
Strand = Plus / Plus
Query: 1 tgacacgctctgagataggcctctgctgatttccccactgccccattcctgccctttgga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacacgctctgagataggcctctgctgatttccccactgccccattcctgccctttggg 260
Query: 61 tgcaccgcagcaaaagaattgtgggtagtagaagctggtgtccgtggagggcatgtcaga 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tgcaccacagcaaaagaattgtgggtagtagaagctggtgtccgtggagggcacgtcaga 320
Query: 121 acctctctgtgctgttgcaaaggccaccgctccactgtcatgcccactccctggaggagt 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 acctctctgtgctgttgcaaaggccaccgcttcactgtcatgcccactccctggaggagt 380
Query: 181 agacataggcaccgaggtagagtgaagctgagtctgggttgagataagagtcagccaggc 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacatagg--------tagagtgaagctgagtctgggttgagataagagtcagccaggc 432
Query: 241 agaggattgagcacactaaacggcctgttaacatcctaaggttgctgtggcaacacagca 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agaggattgggcacactaaacggcctgttaacatcctaaggttgctgtggcaacacagca 492
Query: 301 caagtcgggattccctccagaaatctactctttactgtctggggactggaa------aca 354
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 493 caagtcgggattccctccagaaatctactctttactgtctggg-actggaagcatcaaca 551
Query: 355 gaaatgtacgtacccagtctggggaaggtgggacctctcttacctcatctggcttctcat 414
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 552 gaaatgtacgtacccagtctggggaaggtgggacctctcttacctcatctggtttctcat 611
Query: 415 tg 416
||
Sbjct: 612 tg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_j12.g1 MSMg01no075_j12.g1 CHROMAT_FILE:
MSMg01no075_j12.g1 PHD_FILE: MSMg01no075_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:17 2005
(209 letters)
>mm_chr8_11365114_11365724
Length = 611
Score = 354 bits (183), Expect = e-102
Identities = 204/213 (95%), Gaps = 6/213 (2%)
Strand = Plus / Minus
Query: 1 ggcgttgcaccctcacatctggctatcttggtagaaatatatgagcatatttggtcaggg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggcg-tgcaccctcacatctggctatcttggtagaaatatatgagcatatttggtcaggg 353
Query: 61 tggtgagaaattaaagcatagtttctgaagcatgcttctggtcttcagggagaggtttgc 120
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 352 tggtgagaaattaaagcagagtttctgaagcatggttctggtcttcagggagaggtttgc 293
Query: 121 cctactctactctgtctgt----ctgtccgtctcccccactgctgaggcagcagatgctg 176
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 292 cctactctactctgtctgtttgtctgtccgtctccct-actgctgaggcagcagatgctg 234
Query: 177 aagagaactgaatctgatgatcagggtctcaga 209
|||||||||||||||||||||||||||||||||
Sbjct: 233 aagagaactgaatctgatgatcagggtctcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 611
Length adjustment: 9
Effective length of query: 200
Effective length of database: 602
Effective search space: 120400
Effective search space used: 120400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
