Query= MSMg01no076_f16.b1 MSMg01no076_f16.b1 CHROMAT_FILE:
MSMg01no076_f16.b1 PHD_FILE: MSMg01no076_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:18 2005
(194 letters)
>mm_chr8_106384351_106384944
Length = 594
Score = 344 bits (178), Expect = 2e-99
Identities = 187/190 (98%)
Strand = Plus / Minus
Query: 5 gaattcactatggcccccagttttggagatttgacttcctgctttggttggccccatcat 64
||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 394 gaattcactatggtccacagttttggagatttgacttcctgctttggctggccccatcat 335
Query: 65 cctgggttataatgaatcagggcatgcagttagaagggtgtgaaggattaatacgctcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cctgggttataatgaatcagggcatgcagttagaagggtgtgaaggattaatacgctcac 275
Query: 125 ctcaatagtcagggaccacaccccagtgtggtcttcctccaccttcctcttaattaaccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctcaatagtcagggaccacaccccagtgtggtcttcctccaccttcctcttaattaaccc 215
Query: 185 ggtcctcggc 194
||||||||||
Sbjct: 214 ggtcctcggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no076_f16.g1 MSMg01no076_f16.g1 CHROMAT_FILE:
MSMg01no076_f16.g1 PHD_FILE: MSMg01no076_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:18 2005
(274 letters)
>mm_chr8_106216742_106217415
Length = 674
Score = 393 bits (203), Expect = e-114
Identities = 257/275 (93%), Gaps = 2/275 (0%)
Strand = Plus / Plus
Query: 1 actggccgagtgtcatgccctcatccacgtgcc-agcgtctcagatgctctataaaaact 59
||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||
Sbjct: 201 actggccgagtgtcatgccctcagccacatgccga-cgtctcagatgctctataaaaact 259
Query: 60 gtgcttcatcaaccctggtttaggctcccttggtacactgaggagacagctgtgattctt 119
|||||||| ||||||||| |||||||| ||||||||||||||| |||||| |||||||||
Sbjct: 260 gtgcttcaccaaccctggcttaggctcgcttggtacactgaggggacagccgtgattctt 319
Query: 120 ttacagccgaattcacaggactctcttcctctctgccatcacaatattatagaaaatgag 179
||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 320 ctacagttgaattcacagaactctcttcctctctgccatcacaatattagagaaaatgag 379
Query: 180 tacccaagtcccctggactcgaagtccccaaatgacatatgtatcccatctctgacttga 239
||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 380 tacccaagtccccaggactcgcagtccccaaatgaaatatgtatcccatctctgacttga 439
Query: 240 gccgtgtgaaaacttcttcaaagctgaccatgcac 274
|||| ||||||||||||||||||||||||||||||
Sbjct: 440 gccgggtgaaaacttcttcaaagctgaccatgcac 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
