CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCCTTTCAAGCACAAAAAATAATGTTTTTCTCTGAGAAACAAAGT
CAAAACATCAGCAAATGAAACATTAAAATACTTTGGTGCAATTAAATATG
ACAAAATATGACCTCAGAGTATATCCAGCTTCTATAAACATAGTGCACGG
CAGTTCTAAAAATCCCATATGAGATAGCCGTGAACCCCAGCAACTCCCTC
GTCAGATCAATCAATGGGATTTCAGTCCCAAGATGTCACAAGATATCCCA
TGATGTCCCAAGATGTCTCATGATGTCCCAAGATGACCACCGTAGTCCTA
ATACTTCACTCGTGCACACTCATCTCACCATTGTAGACTCACTTGTGATC
TAACCTGGGTTATTTCTAAGAATTCAGCTAGATAATACAACTTACTAACC
ATGTCTATGCATGCAATCTGAACAGGGAATCCTAGCTGAGACTTCTCTAA
GGATCCAATAGTTGGAAATACAGGATCTAGACAGTTACCTTTAGTGGAGA
CCTTACTTTTCATTTATTATTAATCTTTATCATGTATGCGTTTATCCTTA
TCATGATGCGTGTGTTTGGCGAATATGCGCCTCAATACACATGTGCCCTT
CAGAGCCCACCTGTGCGGAGTCATCTCTCTCCTGAAACACTACCTGCTC

NTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTATGAAGACTAGGCTGGCCTCTA
ACAGAGATTCACCTGCCTCAATTTCCCAAGTACTGAGATTACAGGTACAT
GCTACATCATCTGGCTCTTAAGGGAATTGTTTAGGATTTATGCTATACTT
TCCCATCTTTCAATTTGATCTTCCCATAGGTACCAATTGGACAGTTAAAG
ACAGGGAGAACTGAAAGTCATTTCAAATCAAACCTAAGATATCACCTGCC
ATCTGATGGTCATTAAGCTTGTTATGCCTCAAAACAAATAATGGCTTTTA
TGGGGATATGAGAGAGATCTCTTCAAAGAGGATGTGGAATGTCCAATCCT
GTGATCCAAAGTCATTCCCAAAGCTAGATAGAGGTTCAGCAACTGGGATG
CCGAAGCAGGCCTATTCCATGTTTAAAGCCTACGTTGAACTGTATAGTAA
GACATTGCCTCAAGACAGAGTGGTTGATACAGAGAACGAAGGCAAGGAAG
GGGATAAGGAGGAAAGGAGAGGCTGCAGTGACCCTTGTTGNATGACTAGT
ACGAATTGCCTGGCTGTTGCTAGTGTGCGGTCAACGCCTAGTTCTTTTTC
TCCCCTTTCCTTCTTCTTTTCCTCTTTCTCTTCTTTTCCACTTTCCTCCC
TTCC

Query= MSMg01no076_j06.b1 MSMg01no076_j06.b1 CHROMAT_FILE:
MSMg01no076_j06.b1 PHD_FILE: MSMg01no076_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:36 2005
         (434 letters)



>mm_chr8_33012518_33013351
          Length = 834

 Score =  832 bits (430), Expect = 0.0
 Identities = 433/434 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taatgtttttctctgagaaacaaagtcaaaacatcagcaaatgaaacattaaaatacttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatgtttttctctgagaaacaaagtcaaaacatcagcaaatgaaacattaaaatacttt 260

                                                                       
Query: 61  ggtgcaattaaatatgacaaaatatgacctcagagtatatccagcttctataaacatagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ggtgcaattaaatatgacaaaatatgacctcagagtatatccagcttttataaacatagt 320

                                                                       
Query: 121 gcacggcagttctaaaaatcccatatgagatagccgtgaaccccagcaactccctcgtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacggcagttctaaaaatcccatatgagatagccgtgaaccccagcaactccctcgtca 380

                                                                       
Query: 181 gatcaatcaatgggatttcagtcccaagatgtcacaagatatcccatgatgtcccaagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatcaatcaatgggatttcagtcccaagatgtcacaagatatcccatgatgtcccaagat 440

                                                                       
Query: 241 gtctcatgatgtcccaagatgaccaccgtagtcctaatacttcactcgtgcacactcatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctcatgatgtcccaagatgaccaccgtagtcctaatacttcactcgtgcacactcatc 500

                                                                       
Query: 301 tcaccattgtagactcacttgtgatctaacctgggttatttctaagaattcagctagata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaccattgtagactcacttgtgatctaacctgggttatttctaagaattcagctagata 560

                                                                       
Query: 361 atacaacttactaaccatgtctatgcatgcaatctgaacagggaatcctagctgagactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacaacttactaaccatgtctatgcatgcaatctgaacagggaatcctagctgagactt 620

                         
Query: 421 ctctaaggatccaa 434
           ||||||||||||||
Sbjct: 621 ctctaaggatccaa 634


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space:   350625
Effective search space used:   350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no076_j06.g1 MSMg01no076_j06.g1 CHROMAT_FILE:
MSMg01no076_j06.g1 PHD_FILE: MSMg01no076_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:36 2005
         (373 letters)



>mm_chr8_33156591_33157363
          Length = 773

 Score =  721 bits (373), Expect = 0.0
 Identities = 373/373 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttatgaagactaggctggcctctaacagagattcacctgcctcaatttcccaagtactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cttatgaagactaggctggcctctaacagagattcacctgcctcaatttcccaagtactg 605

                                                                       
Query: 61  agattacaggtacatgctacatcatctggctcttaagggaattgtttaggatttatgcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agattacaggtacatgctacatcatctggctcttaagggaattgtttaggatttatgcta 545

                                                                       
Query: 121 tactttcccatctttcaatttgatcttcccataggtaccaattggacagttaaagacagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tactttcccatctttcaatttgatcttcccataggtaccaattggacagttaaagacagg 485

                                                                       
Query: 181 gagaactgaaagtcatttcaaatcaaacctaagatatcacctgccatctgatggtcatta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gagaactgaaagtcatttcaaatcaaacctaagatatcacctgccatctgatggtcatta 425

                                                                       
Query: 241 agcttgttatgcctcaaaacaaataatggcttttatggggatatgagagagatctcttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agcttgttatgcctcaaaacaaataatggcttttatggggatatgagagagatctcttca 365

                                                                       
Query: 301 aagaggatgtggaatgtccaatcctgtgatccaaagtcattcccaaagctagatagaggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagaggatgtggaatgtccaatcctgtgatccaaagtcattcccaaagctagatagaggt 305

                        
Query: 361 tcagcaactggga 373
           |||||||||||||
Sbjct: 304 tcagcaactggga 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space:   278096
Effective search space used:   278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)