Query= MSMg01no079_e08.b1 MSMg01no079_e08.b1 CHROMAT_FILE:
MSMg01no079_e08.b1 PHD_FILE: MSMg01no079_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:51 2005
(611 letters)
>mm_chr8_33012488_33013501
Length = 1014
Score = 1125 bits (582), Expect = 0.0
Identities = 600/608 (98%), Gaps = 7/608 (1%)
Strand = Plus / Plus
Query: 6 gaattcccttttac---gaaaaaaaaa-aatgtttttctctgagaaacaa-gtcaaaaca 60
||||||||||| | |||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 206 gaattcccttt--caaagaaaaaaaaataatgtttttctctgagaaacaaagtcaaaaca 263
Query: 61 tcagcaaatgaaacattaaaatactttggtgcaattaaatatgacaaaatatgacctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcagcaaatgaaacattaaaatactttggtgcaattaaatatgacaaaatatgacctcag 323
Query: 121 agtatatccagcttttataaacatagtgcacggcagttctaaaaatcccatatgagatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtatatccagcttttataaacatagtgcacggcagttctaaaaatcccatatgagatag 383
Query: 181 ccgtgaaccccagcaactccctcgtcagatcaatcaatgggatttcagtcccaagatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccgtgaaccccagcaactccctcgtcagatcaatcaatgggatttcagtcccaagatgtc 443
Query: 241 acaagatatcccatgatgtcccaagatgtctcatgttgtcccaagatgaccaccgtagtc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 acaagatatcccatgatgtcccaagatgtctcatgatgtcccaagatgaccaccgtagtc 503
Query: 301 ctaatacttcactcgtgcacactcatctcaccattgtagactcacttgtgatctaacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctaatacttcactcgtgcacactcatctcaccattgtagactcacttgtgatctaacctg 563
Query: 361 ggttatttctaagaattcagctagataatacaacttactaaccatgtctatgcatgcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggttatttctaagaattcagctagataatacaacttactaaccatgtctatgcatgcaat 623
Query: 421 ctgaacagggaatcctagctgagacttctctaaggatccaatagttggaaatacaggatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgaacagggaatcctagctgagacttctctaaggatccaatagttggaaatacaggatc 683
Query: 481 tagacagttacctttagtggagaccttacatttcatttattattaatctttatcatgtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tagacagttacctttagtggagaccttacatttcatttattattaatctttatcatgtat 743
Query: 541 gtgtttatccttatcatgatgtgtgtgtttggggaagatgtggcaaaacacaaatgtggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtgtttatccttatcatgatgtgtgtgtttggggaagatgtggcaaaacacaaatgtggg 803
Query: 601 ggtcagag 608
||||||||
Sbjct: 804 ggtcagag 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1014
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1004
Effective search space: 603404
Effective search space used: 603404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_e08.g1 MSMg01no079_e08.g1 CHROMAT_FILE:
MSMg01no079_e08.g1 PHD_FILE: MSMg01no079_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:51 2005
(557 letters)
>mm_chr8_33156514_33157470
Length = 957
Score = 1077 bits (557), Expect = 0.0
Identities = 557/557 (100%)
Strand = Plus / Minus
Query: 1 cttatgaagactaggctggcctctaacagagattcacctgcctcaatttcccaagtactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttatgaagactaggctggcctctaacagagattcacctgcctcaatttcccaagtactg 682
Query: 61 agattacaggtacatgctacatcatctggctcttaagggaattgtttaggatttatgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agattacaggtacatgctacatcatctggctcttaagggaattgtttaggatttatgcta 622
Query: 121 tactttcccatctttcaatttgatcttcccataggtaccaattggacagttaaagacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tactttcccatctttcaatttgatcttcccataggtaccaattggacagttaaagacagg 562
Query: 181 gagaactgaaagtcatttcaaatcaaacctaagatatcacctgccatctgatggtcatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagaactgaaagtcatttcaaatcaaacctaagatatcacctgccatctgatggtcatta 502
Query: 241 agcttgttatgcctcaaaacaaataatggcttttatggggatatgagagagatctcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcttgttatgcctcaaaacaaataatggcttttatggggatatgagagagatctcttca 442
Query: 301 aagaggatgtggaatgtccaatcctgtgatccaaagtcattcccaaagctagatagaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaggatgtggaatgtccaatcctgtgatccaaagtcattcccaaagctagatagaggt 382
Query: 361 tcagcaactgggaggccgaagcagggctattccatgtttaaagcctaggttgaactgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagcaactgggaggccgaagcagggctattccatgtttaaagcctaggttgaactgtat 322
Query: 421 agtaagacattgcctcaagacagagtggcagaaagagagaaggaagggaaggaaggggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaagacattgcctcaagacagagtggcagaaagagagaaggaagggaaggaaggggaa 262
Query: 481 caggaggaaaggagaggcagcagtgaccctctttgtatgagtagtaggaactgcctggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaggaaaggagaggcagcagtgaccctctttgtatgagtagtaggaactgcctggct 202
Query: 541 ggtgggagtgcggggga 557
|||||||||||||||||
Sbjct: 201 ggtgggagtgcggggga 185
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
