Query= MSMg01no079_h12.b1 MSMg01no079_h12.b1 CHROMAT_FILE:
MSMg01no079_h12.b1 PHD_FILE: MSMg01no079_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:06 2005
(426 letters)
>mm_chr8_106384381_106385206
Length = 826
Score = 632 bits (327), Expect = 0.0
Identities = 339/343 (98%)
Strand = Plus / Minus
Query: 1 tttggagatttgacttcctgctttggctggccccatcatcctgggttataatgaaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 343 tttggagatttgacttcctgctttggctggccccatcatcctgggttataatgaatcagg 284
Query: 61 gcatgcagttagaagggtgtgaaggattaatacgctcacctcaatagtcagggaccacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gcatgcagttagaagggtgtgaaggattaatacgctcacctcaatagtcagggaccacac 224
Query: 121 cccagtgtggtcttcctccaccttcctcttaattaacccggtcctcggcctttgggatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cccagtgtggtcttcctccaccttcctcttaattaacccggtcctcggcctttgggatga 164
Query: 181 tgctgtccgcatttacagtgggtcttcccccgctgtggctgtctctaatgtcaatcaccc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tgctgtccacatttacagtgggtcttcccccgctgtggctgtctctaatgtcaatcaccc 104
Query: 241 ctggaaacacctctatagacatatccagaaggtacttctcagtctaatgtagttggcaac 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctggaaacacctctatagacacatccagaaggtacttctcagtctaatgtagttggcaac 44
Query: 301 tgaaagtctcatagattcatctagctgtacttggctgcagtta 343
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 43 tgaaagtctcatagattcatcaagctgtacttggctgcagtta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_h12.g1 MSMg01no079_h12.g1 CHROMAT_FILE:
MSMg01no079_h12.g1 PHD_FILE: MSMg01no079_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:06 2005
(373 letters)
>mm_chr8_106216742_106217514
Length = 773
Score = 605 bits (313), Expect = e-177
Identities = 358/373 (95%), Gaps = 2/373 (0%)
Strand = Plus / Plus
Query: 1 actggccgagtgtcatgccctcagccacgtgccag-cgtctcagatgctctatataaact 59
|||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||
Sbjct: 201 actggccgagtgtcatgccctcagccacatgcc-gacgtctcagatgctctataaaaact 259
Query: 60 gtgcttcatcaaccctggtttaggctcccttggtacactgaggggacagctgtgattctt 119
|||||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 260 gtgcttcaccaaccctggcttaggctcgcttggtacactgaggggacagccgtgattctt 319
Query: 120 ttacagttgaattcacaggactctcttcctctctgccatcacaatattagagaaaatgag 179
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctacagttgaattcacagaactctcttcctctctgccatcacaatattagagaaaatgag 379
Query: 180 tacccaagtcccctggactcgaagtccccaaatgaaatatgtatcccatctctgacttga 239
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacccaagtccccaggactcgcagtccccaaatgaaatatgtatcccatctctgacttga 439
Query: 240 gccgtgtgaaaacttcttcaaagctgaccatgcactgtacctcatgacttgagccttctg 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccgggtgaaaacttcttcaaagctgaccatgcactgtacctcatgacttgagccttctg 499
Query: 300 ttgataaacacaagcagtatgttgaatatacagagatgcatacacttaaaaatgttaatt 359
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 500 ttgataaacacaaacagtatgttgaatacacagagatgcatacacttaaaaatgttaatt 559
Query: 360 ctcatgggaaagc 372
|||||||||||||
Sbjct: 560 ctcatgggaaagc 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
