Query= MSMg01no079_m05.b1 MSMg01no079_m05.b1 CHROMAT_FILE:
MSMg01no079_m05.b1 PHD_FILE: MSMg01no079_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:28 2005
(353 letters)
>mm_chr8_125214289_125215037
Length = 749
Score = 596 bits (308), Expect = e-175
Identities = 338/350 (96%), Gaps = 4/350 (1%)
Strand = Plus / Minus
Query: 4 ggaattctgacctttctgtggattccctgtgcaggcccaagcccgtatttagcacatggt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ggaattctgacctttctgtggattccctgtgcaggcccaagcccgtatttagcacatggt 490
Query: 64 cagttggggaggggttgcccattccagaagccagtggttctgtggcactttttaacattg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cagttggggaggggttgcccattccagaagccagtggttctgtggcactttttaacattg 430
Query: 124 ggcaggcgtggcctctagagattactcgtttgaatgattacaaaatggccttgcttagtt 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 429 ggcaggcgtggcctctagagattactcgtttgcatgattacaaaatggccttgcttagtt 370
Query: 184 tggtcacacaagaacttcggctgtttctctctgggtggacgaccagcaatgacccagggt 243
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 369 tggtcacacaagaacttcggctgtttctctctgggtgga----cagcaatgacccagggt 314
Query: 244 atgaagttctcatgggtgagttaggcttgtaatttcaccactgagtcacacagatcaagg 303
|||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||
Sbjct: 313 atgaagttctcatgggtgagttaggcttgtaaattcaccattgagtcatacaggtcaagg 254
Query: 304 tcagagcctctcactcgccacgcaaaggcatgcactggcaagtgccacac 353
||||||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 253 tcagagcctctcactcgacacgcaaaggcacgcaccggcaagtgccacac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 749
Length adjustment: 9
Effective length of query: 344
Effective length of database: 740
Effective search space: 254560
Effective search space used: 254560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_m05.g1 MSMg01no079_m05.g1 CHROMAT_FILE:
MSMg01no079_m05.g1 PHD_FILE: MSMg01no079_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:29 2005
(345 letters)
>mm_chr8_125047113_125047857
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Plus
Query: 1 agcagctagaagctgcgcgctgggagtccggagtcaatgaagcctagtggccacacctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagctagaagctgcgcgctgggagtccggagtcaatgaagcctagtggccacacctgc 260
Query: 61 caccccccaggaaggctgaaagcaaaaacttaagccaaaccaggcccagaaggctctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccccccaggaaggctgaaagcaaaaacttaagccaaaccaggcccagaaggctctggc 320
Query: 121 caatcccccttcctggaagaggagggttggtacagtcagctgagggcacatgaggaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatcccccttcctggaagaggagggttggtacagtcagctgagggcacatgaggaagcc 380
Query: 181 agctgcccggacttgttcctaaagcgtgggactaaggctcctagactgggttagcctggg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgcccggacttgttcctaaagcttgggactaaggctcctagactgggttagcctggg 440
Query: 241 cagtgtggctggatatcttagcacctttgatcaggcccaggtgcagccagcaggaaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtgtggctggatatcttagcacctttgatcaggcccaggtgcagccagcaggaaagag 500
Query: 301 ggtcagtcaagcctaaggtgcattttgttcctttgaagctgtcct 345
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ggtcagtcaagcctaaggtgcattttgctcctttgaagctgtcct 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
