ATAATTTGCGGCGCTAAACGACTCCTATTCAAAGAGGATCCGCGGAATTC
ACATCTCCTCTTTGCATGGCTCTCTGCAGTTAGAATTTAAGAAAGTTCTC
CCACCAATATCTGCATGCAAAGGACTATACTTCAGCTGAGTCTGTACTTT
TGTTAGGAATGAGTATCCCCAGGCACAGTTCTACATAAAAACTGGACAAG
CTTTTCAAAGATACTACTTCAAAAGAAATCAAATGTTTTGTAGATCCAAA
TATATAAGCACTCCTTAAATCAAAAAAATCCTTGAATATATCTCAAGTAA
ATATCAAGTATGTCTGCCAAACAAAATTACATGTTTTATTAATTTATTTT
TTAATCATTTTTACTTTTAATTATAATATAATTACATCATTTTCCCACTT
CCCTTCCCTCCCTCCAAACCATCCTATGTACTTATCCCCTTGCATTCTCT
CAAATTGATTGCCTGTATTTGTGTTTGAGTATGCATGTGTATGTGTGTGT
ATGTGTGTGCGCCTGTTTATTCCCTTTTTCCCCCTTTTCCACCCCCCACT
CTTTACCCTCTTTCCATTTTCCCCATCCCCCCCCCCCCTTTCCCTCCTAT
TCTTCTCTTACCCTCATTTTCCCTTCCTCCCATACCCTCCTCTTTACTTC
TTTCTCCCCTTTTTTCCCTTTCCACCCTTCATT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGCACTGGATCCATCTGGCCCTGAGCTTTTC
TGGTTGGGAGACTTTTAATTACTGCTACTGTTTCACTGGGGGGTTATGGG
CCTATTTAAATTGCTTATCCTATCTTGTTTTACCTTTGGTGAATTATATA
TATCAAGAATTTCATCCATTCCCTTTAGGCTTTCCCATTTGATGGAACAC
AGATGTTTGAAATATATCATTATGATTCTCTGAATTTCCCTGTTTATTTT
TTAATGTGTCCCTTTCATATCTAATTTTACTAATGTGAAACTTTTCACTC
CATAGTTTAGTTCATTTGGCTAATGGTTCGTCAGTCTTATTCATATCTTC
CAAGAGCAAATTCTTCATTTCTCTGATTCTTTGTATTTTTATTGTTGCTA
TTGTTTGTTTCTCTCATTGATTTCTGTCCAGAGTATGATTATATCTTGTA
AAATACTCTTTTTGGTTATTATTTATTCATTTTGTTCAAGCACTTTCAGG
TGTATTTCTCATTTTCTGATATGATTACTTTCCACGTTGTTTTTGACACA
TTCCTGTTACGTTTATGCCCCTGTTTCTTCCCGCCCTTTTATTGTGTTTC
ATACGCTCGGACATGTTCGCATTCCCCCCTTCCTCTCCCCCTTTAAGG

Query= MSMg01no080_d13.b1 MSMg01no080_d13.b1 CHROMAT_FILE:
MSMg01no080_d13.b1 PHD_FILE: MSMg01no080_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:03 2005
         (446 letters)



>mm_chr8_43975219_43976064
          Length = 846

 Score =  853 bits (441), Expect = 0.0
 Identities = 444/445 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catggctctctgcagttagaatttaagaaagttctcccaccaatatctgcatgcaaagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggctctctgcagttagaatttaagaaagttctcccaccaatatctgcatgcaaagga 260

                                                                       
Query: 61  ctatacttcagctgagtctgtacttttgttaggaatgagtatccccaggcacagttctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatacttcagctgagtctgtacttttgttaggaatgagtatccccaggcacagttctac 320

                                                                       
Query: 121 ataaaaactggacaagcttttcaaagatactacttcaaaagaaatcaaatgttttgtaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaaaactggacaagcttttcaaagatactacttcaaaagaaatcaaatgttttgtaga 380

                                                                       
Query: 181 tccaaatatataagcactccttaaatcaaaaaaatccttgaatatatctcaagtaaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaaatatataagcactccttaaatcaaaaaaatccttgaatatatctcaagtaaatat 440

                                                                       
Query: 241 caagtatgtctgccaaacaaaattacatgttttattaatttattttttaatcatttttac 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagtaagtctgccaaacaaaattacatgttttattaatttattttttaatcatttttac 500

                                                                       
Query: 301 ttttaattataatataattacatcattttcccacttcccttccctccctccaaaccatcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttaattataatataattacatcattttcccacttcccttccctccctccaaaccatcc 560

                                                                       
Query: 361 tatgtacttatccccttgcattctctcaaattgattgcctgtatttgtgtttgagtatgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgtacttatccccttgcattctctcaaattgattgcctgtatttgtgtttgagtatgc 620

                                    
Query: 421 atgtgtatgtgtgtgtatgtgtgtg 445
           |||||||||||||||||||||||||
Sbjct: 621 atgtgtatgtgtgtgtatgtgtgtg 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space:   364496
Effective search space used:   364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)