Query= MSMg01no080_l10.b1 MSMg01no080_l10.b1 CHROMAT_FILE:
MSMg01no080_l10.b1 PHD_FILE: MSMg01no080_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:42 2005
(259 letters)
>mm_chr8_92007399_92008058
Length = 660
Score = 466 bits (241), Expect = e-136
Identities = 253/259 (97%), Gaps = 5/259 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagttct---tccatgtataaagaaaaaagcaggcacaaaagcctctgagagtt 60
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggaattcagttcttaat--atgtataaagaaaaaagcaggcacaaaagcctctgagagtt 371
Query: 61 gttgttgcgacttagcttatacggagagaaaagtaggtaacaagtattatctatcaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gttgttgcgacttagcttatacggagagaaaagtaggtaacaagtattatctatcaacac 311
Query: 121 aagaaagctcctttctaattttatgaaaaattttctaaattctccatataaatacacgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagaaagctcctttctaattttatgaaaaattttctaaattctccatataaatacacgac 251
Query: 181 accattatttctgtatgtatgtgtgcatatgcatataaattccctcctgtgtgtgtgttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 accattatttctgtatgtatgtgtgcatatgcatataaattccctcctgtgtgtgtgtgt 191
Query: 241 gtgtgtgtgtgtgtttgtg 259
|||||||||||||||||||
Sbjct: 190 gtgtgtgtgtgtgtttgtg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 660
Length adjustment: 9
Effective length of query: 250
Effective length of database: 651
Effective search space: 162750
Effective search space used: 162750
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no080_l10.g1 MSMg01no080_l10.g1 CHROMAT_FILE:
MSMg01no080_l10.g1 PHD_FILE: MSMg01no080_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:42 2005
(309 letters)
>mm_chr8_91832128_91832836
Length = 709
Score = 598 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 1 tctacttaaaggtccaagtcagccctgagaaatgccaggattttagcaacaaaacaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctacttaaaggtccaagtcagccctgagaaatgccaggattttagcaacaaaacaaact 260
Query: 61 cacaagccttctccattcgtgagagtcaggctggtttcctctcaacaaggtcgcaaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaagccttctccattcgtgagagtcaggctggtttcctctcaacaaggtcgcaaggct 320
Query: 121 ctttgctggagtgtctcggtccagcagtagattggaaaaatgtccaagcaggggacgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgctggagtgtctcggtccagcagtagattggaaaaatgtccaagcaggggacgaga 380
Query: 181 gttctctcccggatgagttcatttcaatagtcactgtgtttcatccgatgcagctggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctctcccggatgagttcatttcaatagtcactgtgtttcatccgatgcagctggtta 440
Query: 241 catttttaataggcagatggctaattttacagttccaagccaatctctcattggatagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttttaataggcagatggctaattttacagttccaagccaatctctcattggatagca 500
Query: 301 tccagaaag 309
|||||||||
Sbjct: 501 tccagaaag 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
