Query= MSMg01no080_l22.b1 MSMg01no080_l22.b1 CHROMAT_FILE:
MSMg01no080_l22.b1 PHD_FILE: MSMg01no080_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:45 2005
(374 letters)
>mm_chr8_46907372_46908146
Length = 775
Score = 692 bits (358), Expect = 0.0
Identities = 367/370 (99%), Gaps = 1/370 (0%)
Strand = Plus / Minus
Query: 6 gaattcttttggagt-agacggctttacttctaatgactttattgagctggaaagaaaaa 64
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gaattcttttggagtaagaaggctttacttctaatgactttattgagctggaaagaaaaa 516
Query: 65 tcatattttgtagaatacagctgttctagtactggaattcaaactctgtgctataaatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tcatattttgtagaatacagctgttctagtactggaattcaaactctgtgctataaatgt 456
Query: 125 gcaacagcctcactggcccctcactacactcttgagtatttcctgatgatgggatgcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcaacagcctcactggcccctcactacactcttgagtatttcctgatgatgggatgcaga 396
Query: 185 taaagttggctccagggagttctaggaaagagcttagcctttctggagcttggcatccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 395 taaagttggctccagggagttctaggaaagagcttagcctttctggagcctggcatccaa 336
Query: 245 gttcccacattagagatttcttcccttcttaataacgttctcttctagtgggtaatttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gttcccacattagagatttcttcccttcttaataacgttctcttctagtgggtaatttca 276
Query: 305 gtcatttacatactttgagccatttggagtctgctgaggtcttttgttgggagaggcttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtcatttacatactttgagccatttggagtctgctgaggtcttttgttgggagaggcttc 216
Query: 365 agcctgtggt 374
||||||||||
Sbjct: 215 agcctgtggt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 775
Length adjustment: 9
Effective length of query: 365
Effective length of database: 766
Effective search space: 279590
Effective search space used: 279590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_l22.g1 MSMg01no080_l22.g1 CHROMAT_FILE:
MSMg01no080_l22.g1 PHD_FILE: MSMg01no080_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:45 2005
(452 letters)
>mm_chr8_46800841_46801692
Length = 852
Score = 851 bits (440), Expect = 0.0
Identities = 449/452 (99%)
Strand = Plus / Plus
Query: 1 atttgaatgatgaccaaggcgaaggaggattccatatttgaaataatttatccaggattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgaatgatgaccaaggcgaaggaggattccatatttgaaataatttatccaggattc 260
Query: 61 acacccttgaaggctaggggatgttcacttcttgctagcagaggaggttccatgttggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacccttgaaggctaggggatgttcacttcttgctagcagaggaggttccatgttggca 320
Query: 121 actgtgggtcagccccacttctaagagctctgtgcattttgatccatgaattattcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgtgggtcagccccacttctaagagctctgtgcattttgatccatgaattattcccac 380
Query: 181 aaccctaagaggtgggctgcactgccagccctatttctaggtgaggaaactctctctgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccctaagaggtgggctgcactgccagccctatttctaggtgaggaaactctctctgac 440
Query: 241 tcagacaaagcaagcgagggactttttacaattacccatctgcatatggcagaaagggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagacaaagcaagcgagggactttttacaattacccatctgcatatggcagaaagggct 500
Query: 301 ttgacaaagctgactgggctcctggttcaatgctactgcttataacctggatcaatgggg 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgacaaagctgactgggctcccggttcaatgctactgcttataacctggatcaatgggg 560
Query: 361 ggcagcatggtcccctactccagttattgtttggaaaccaaaggttgctggtatgctgcc 420
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 561 ggcagcatggtcccctactccagttactgtttggaaaccaaaggttgctgggatgctgcc 620
Query: 421 ggtccttaaaacaactccagtctggctcatga 452
||||||||||||||||||||||||||||||||
Sbjct: 621 ggtccttaaaacaactccagtctggctcatga 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
