Query= MSMg01no082_m09.b1 MSMg01no082_m09.b1 CHROMAT_FILE:
MSMg01no082_m09.b1 PHD_FILE: MSMg01no082_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:20 2005
(325 letters)
>mm_chr8_128954322_128955046
Length = 725
Score = 582 bits (301), Expect = e-171
Identities = 319/325 (98%)
Strand = Plus / Minus
Query: 1 gacttcccctccagagctgtttcctccctgtgctccccctcaggaatgccaggaagaact 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 525 gacttcccctccagagctgtttcctccctgtcctccccctcaggaatgccaggaagaact 466
Query: 61 ggtagcgcatccaggaccatttcttcttctccaccttccaccccctgaaggactactgtc 120
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 465 ggcagcgcatccaggaccatttcttcttctccaccttccacccccttaaggactactgtc 406
Query: 121 tggaggtaagctgagagcgcagcatgtagtctgtctgctgtctgcagtcctgatgctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tggaggtaagctgagagcgcagcatgtagtctgtctgctgtctgcagtcctgatgctctt 346
Query: 181 tcctgccccagctgttgaaggctacgatgaggttcatcctctgtccccttgaccctgtga 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tcctgccccagctgttgaacgctacgatgaggttcatcctctgtccccttgaccctgtga 286
Query: 241 cgttgtgaacgtgcttgcggttcatctctcggcagtgacaactggctagtcatttctcac 300
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 285 cgttgtgaacgtgcttgcggttcatccctcagcagtgacaactggctagtcatttctcac 226
Query: 301 tttctgtctctctggcagtgtctgg 325
|||||||||||||||||||||||||
Sbjct: 225 tttctgtctctctggcagtgtctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_m09.g1 MSMg01no082_m09.g1 CHROMAT_FILE:
MSMg01no082_m09.g1 PHD_FILE: MSMg01no082_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:20 2005
(446 letters)
>mm_chr8_128805355_128806200
Length = 846
Score = 758 bits (392), Expect = 0.0
Identities = 433/452 (95%), Gaps = 12/452 (2%)
Strand = Plus / Plus
Query: 1 attcgccatgttcaaggtgctgccttgaacatcgaccccttttcactccacgtggtcctc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 attcgccatgttcaaggtgctgccttgaacatcgaccccttt-cactccacgtggtcctc 259
Query: 61 tgacagctttaacgctgcctaagaacttggaagaaacgcagttccaggcatgtcacacac 120
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 260 tgacagctttaacactgcctaagaacttggaagaaatgcagttccaggcatgtcacacac 319
Query: 121 acaccaagaacctggtgctgctcccacacagtgacaggatgctgtagaaacacaacagga 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 acaccaagaacctggtgctgctcccacacagcgacaggatgctgtagaaacacaacagga 379
Query: 181 cccctattggccatgatagaagcaacccta-aggaggcaggctgcaggatcatgcacaat 239
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 380 cccctattggccatgatagaagcaaccctacaggaggcaggctgcaggatcatgtttaat 439
Query: 240 cttgactgtgttttt-----gggagggacaggaagcccacgagagtggcagtgtgtggag 294
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cttgactgtg-----caccagggagggacaggaagcccacgagagtggcagtgtgtggag 494
Query: 295 ctctgcaggcacagagggttttctggtggtcctggaaagctggaggtgtcttctaactgg 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctctgcaggcacagagggttttctggtggtcctggaaagctggaggtgtcttctaactgg 554
Query: 355 agggcacattagagcatctcaagaggccaaacccttgccagaggtaagaagaaaagccta 414
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 555 agggcacattagagcatctcaagaggccaaacccttgccagaggtaagaaggaaagccta 614
Query: 415 ggggtatcacatggctgtgagttggcaatgta 446
||||||||||||||||||||||||||||||||
Sbjct: 615 ggggtatcacatggctgtgagttggcaatgta 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
