AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCACTACACACCAAATTCACGTAATAAAGAAAGAAATCAAGGACTTTT
TAGAGTTCAATGAAAATGAACCCACAACATACCCAAACTTATGGGACACA
ATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCTACAAAAA
GAAACTAGAGAGAGCACACACTAGCAGCTTGACAATCCACCTAAAAGCTC
TAGAACAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAAGGCAGGAAATA
ATCAAACTCAGGGGCGAAATCAACCAAGTGGAAACAAGAAGAACTATTCA
AAGAATCAACCAAATGAGGAGCTGGTTCTTTGAGAAAATCAACAAGATAG
ACAAACCCTTACCCAGACTCACTAGAAGGCACAGGGAAAGCATTCTAATT
AACAAAATCAGAAATGAAAAGGGAGACATGACAACAAATCATGAAGAAAT
CCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGG
AGAACTGGATGAAATGGAGAAGTTTCTAGACAGATACCAGGTACCAAATT
TGAATCAAGACCAGGCTAATGATCTAAACAGCCCTATATCCCCCAAAAGA
AATAGAAGCAGCCATTAATAGTGTCCCATCCAAAAAAAGCCCAGGACTAG
ATGG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTAGATCCCATGCAAAAAACAAAGGTACACAG
TGACCTGTGCTTATAATTTCTATTCTGGGAATAGCGGGGTTAGAAACAAG
CTGAGGATTCCAGAGATTCATTGGCTCACCTGATTTCCCAGTTTCTTTCT
CAAAAACCAATTAGGACAGCAATTGAGGTTACACCTAAAATAGATTTCTG
GATTCCATATATAGAGCTCATACATGTATTTCTATCCATATGTAGATGAC
ACATGTGCCCACTCACGAACATACACAAAGAAAAATCCATAGTCACAGAG
GTTACATTCATTTTACAACATATATTTATATAATAAAAAGAACTACTGAG
AAATCTCTTGAGATGTTACAACATTGAATACTGCCTATATTAATGAAAGT
AGGAACACTGATATATGTTATATATATATATATATATATATATATATACA
CACACACACACATAATTTATGTAGTTCAAACACATATCAATCTGTTGTTC
ACTGAGTTTTATGCTACATGAAATTCCTGGTGTCTTCATTTTTGTATGGT
AATATTTGGTAATATTAATTCAAATTTTTAATATTTGTAAAACTAGGATC
TTATTTATTGCGAATATTTTCCTTCCTTTTCCGATGCCCTTTTCTTTTTT
T

Query= MSMg01no083_m16.g1 MSMg01no083_m16.g1 CHROMAT_FILE:
MSMg01no083_m16.g1 PHD_FILE: MSMg01no083_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:37 2005
         (469 letters)



>mm_chr8_5947679_5948547
          Length = 869

 Score =  806 bits (417), Expect = 0.0
 Identities = 446/469 (95%), Gaps = 22/469 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagatcccatgcaaaaaacaaaggtacacagtgacctgtgcttataatttctattctggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagatcccatgcaaaaaacaaaggtacacagtgacctgtgcttataatttctattctggg 260

                                                                       
Query: 61  aatagcggggttagaaacaagctgaggattccagagattcattggctcacctgatttccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatagcggggttagaaacaagctgaggattccagagattcattggctcacctgatttccc 320

                                                                       
Query: 121 agtttctttctcaaaaaccaattaggacagcaattgaggttacacctaaaatagatttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttctttctcaaaaaccaattaggacagcaattgaggttacacctaaaatagatttct 380

                                                                       
Query: 181 ggattccatatatagagctcatacatgtatttctatccatatgtagatgacacatgtgcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggattccatatatagagctcatacatgtatttctatccatatgtagatgacacatgtgcc 440

                                                                       
Query: 241 cactcacgaacatacacaaagaaaaatccatagtcacagaggttacattcattttacaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactcacgaacatacacaaagaaaaatccatagtcacagaggttacattcattttacaac 500

                                                                       
Query: 301 atatatttatataataaaaagaactactgagaaatctcttgagatgttacaacattgaat 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 atatatttatataataaaaagaactactgagaaatctcttgagatgttacaaaattgaat 560

                                                                       
Query: 361 actgcctatattaatgaaagtaggaacactgatatatgttatatatatatatatatatat 420
           ||||||||||||||||||||||||||||||||||||||          ||||||||||||
Sbjct: 561 actgcctatattaatgaaagtaggaacactgatatatg----------atatatatatat 610

                                                            
Query: 421 atatatatacacacacacacacataatttatgtagttcaaacacatatc 469
           |||||||||||            ||||||||||||||||||||||||||
Sbjct: 611 atatatataca------------taatttatgtagttcaaacacatatc 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)