Query= MSMg01no084_h19.b1 MSMg01no084_h19.b1 CHROMAT_FILE:
MSMg01no084_h19.b1 PHD_FILE: MSMg01no084_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:31 2005
(350 letters)
>mm_chr8_88570014_88570763
Length = 750
Score = 650 bits (336), Expect = 0.0
Identities = 342/344 (99%)
Strand = Plus / Plus
Query: 7 ggaattctttctaagctatctcattaaatgaaacagtaatgtgcaaaacaatgtctatta 66
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattctttctaagctatatcattaaatgaaacagtaatgtgcaaaacaatgtctatta 266
Query: 67 tatggaattcttattttttaaatgtatttattcacttgtgtagaaaaaaatccaggaggg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tatggaattcttattttttaaatgtatttattcacttgtgtagaaaaaaatccaggaggg 326
Query: 127 ataaatcagaaatgagtatgatgtatgctgttcagagaggataaaaacaaatgggaaatg 186
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ataaatcagaaacgagtatgatgtatgctgttcagagaggataaaaacaaatgggaaatg 386
Query: 187 gtgaatgatagatacagcataacagagttgggcacagagcaagccttccccaagctggct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgaatgatagatacagcataacagagttgggcacagagcaagccttccccaagctggct 446
Query: 247 gcagtgtatggaacgcctcctcctaagtagtgggtgtcacatgctcccaactcataaata 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcagtgtatggaacgcctcctcctaagtagtgggtgtcacatgctcccaactcataaata 506
Query: 307 gtgggagtgttgaatacatgcagtattaagtaatgtaataaaac 350
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtgggagtgttgaatacatgcagtattaagtaatgtaataaaac 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_h19.g1 MSMg01no084_h19.g1 CHROMAT_FILE:
MSMg01no084_h19.g1 PHD_FILE: MSMg01no084_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:32 2005
(278 letters)
>mm_chr8_88713839_88714515
Length = 677
Score = 282 bits (146), Expect = 1e-80
Identities = 170/178 (95%), Gaps = 1/178 (0%)
Strand = Plus / Minus
Query: 1 caagttgctttttgtcatggtatcttatcaggtcaatagaaaccctaactaggactgcca 60
|||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 432 caagttgcgttttgtcatggtatcttatcaggtcaatagaaaccccaactaagactgcca 373
Query: 61 gggacacagatacaaaaagcagttgcctggctttcatcttgattttagctaccttgtggt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 372 gggacacagatacaaaaagcagttgtctggctttcatcttgattttagctaccttgtggt 313
Query: 121 cccagagaatggatcaagcttcttagcaaaaggcacctcaaggccggcatccactgga 178
|||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 312 cccagaaaatggatcaagcttcttagcaaaaggcacctcaaggctggcaccca-tgga 256
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 677
Length adjustment: 9
Effective length of query: 269
Effective length of database: 668
Effective search space: 179692
Effective search space used: 179692
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
