Query= MSMg01no084_j11.b1 MSMg01no084_j11.b1 CHROMAT_FILE:
MSMg01no084_j11.b1 PHD_FILE: MSMg01no084_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:39 2005
(577 letters)
>mm_chr8_16061850_16062825
Length = 976
Score = 1062 bits (549), Expect = 0.0
Identities = 567/573 (98%), Gaps = 1/573 (0%)
Strand = Plus / Plus
Query: 5 gaattcatacgttcttcccagatgaaagattataattcttggtatgccaatcataaaatc 64
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatgttcttttcagatgaaagattataattcttggtatgccaatcataaaatc 264
Query: 65 tagcagctatttatcatatgcttcagggggggtttagacaatgggtctatcatcaccagg 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 tagcagctatttatcatatgcttcagggggg-tttagacaatgggtctatcatcaccagg 323
Query: 125 ccacctcaggatagagaggctgccctgaatcttccacactctggggctgactttggatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccacctcaggatagagaggctgccctgaatcttccacactctggggctgactttggatct 383
Query: 185 tctcgggtagtttaatggcaggtacttattccccccatgcaaaatataactgagtgattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctcgggtagtttaatggcaggtacttattccccccatgcaaaatataactgagtgattt 443
Query: 245 cttaaaatgttgccgcaggcaaaatattctgatcacattgttttacagtgacccagttag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttaaaatgttgccgcaggcaaaatattctgatcacattgttttacagtgacccagttag 503
Query: 305 gatgacatataacaaaggaagctgcaaaattttattattgtccctgcagagtctactctc 364
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gatgacacataacaaaggaagctgcaaaattttattattgtccctgcagagtctactctc 563
Query: 365 agtatactgacatttgcttttctttaattccaactgtcagatacaagtctgcatgaattc 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtatactgatatttgcttttctttaattccaactgtcagatacaagtctgcatgaattc 623
Query: 425 tgctctattttactcatttataatttataacctgcctgcttctaaaagtgatttttttca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgctctattttactcatttataatttataacctgcctgcttctaaaagtgatttttttca 683
Query: 485 atggcttactaaaaaagatctacatacatattcctacccaagcagaaatgaaaaaccaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atggcttactaaaaaagatctacatacatattcctacccaagcagaaatgaaaaaccaaa 743
Query: 545 gcactgaatttattaaagatgtcaatcattttg 577
|||||||||||||||||||||||||||||||||
Sbjct: 744 gcactgaatttattaaagatgtcaatcattttg 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 976
Length adjustment: 10
Effective length of query: 567
Effective length of database: 966
Effective search space: 547722
Effective search space used: 547722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_j11.g1 MSMg01no084_j11.g1 CHROMAT_FILE:
MSMg01no084_j11.g1 PHD_FILE: MSMg01no084_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:39 2005
(263 letters)
>mm_chr8_16194289_16194951
Length = 663
Score = 501 bits (259), Expect = e-146
Identities = 262/263 (99%)
Strand = Plus / Minus
Query: 1 atcattacaactctggttttcttggtaaacagggtcttgcactgttgtcttacatgagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atcattacaactctggttttcttggtaaacagggtcttgcactgttgtcttacatgagga 404
Query: 61 acaatttactgagttttgcctggaggttactgagagatttgcctgtcttgatgtatttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 acaatttactgagttttgcctggaggttactgagagatttgcctgtcttgatgtatttac 344
Query: 121 ttggtgctggatctagacagtaagcatggcattgccagctcttttttatagttacaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttggtgctggatctagacagtaagcatggcattgccagctcttttttatagttacaacaa 284
Query: 181 cttagacacaatctcatcaggaaatctcatagctggtggattgccaagcaacagatacca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 283 cttagacacaatctcatcaggaaatctcatagctggtggattgccaagcaacagatgcca 224
Query: 241 ttggcttttacccacccacagat 263
|||||||||||||||||||||||
Sbjct: 223 ttggcttttacccacccacagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
