CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATCTATACGAAGAAGAAGCTCTCAGAAAAATGGGATATTACTTCAG
CAGAATTTCCTCAGCTTTGGTCAGACCGTGTAGCTCAAAACACAGTTATA
GACATATTAAGTAATTTAAAGAGATGAAATGTTTAAATAATATATTTAGA
AATAACCGAGCATTAATAAATATTAACAAACATAAGTAATGCCAAGAGCG
GCTTCCTTTGAAAATAAATTGCGACCAGCTGCACTCTTAGAGCTTCATCT
CAGGCAGTTAAGCAGCCTTTACGCTTGTATCCCCTCACTACTCCATGCTG
GGATTCTGTGAGGCTTGAGCTTGTAGCAGTCTTGAGCCTGGTGTCACACC
CGCTGAGAGTTCAGATTTGCAGCCGGCCTGCGATATCCAGAAAATAATGT
TCCCTGTGATCATCTGTCACCTCTGACCCTTAAGCCCCACCTCTATCTCC
CCTAATGATCCCTGAGTGTGGAGGGCAGGGGTGTAATACAGATGTCCCAT
TTAAAGCTGAGCACTCTTCAGTTATGTAATCCAGGCATGTCAACCAGTCA
ATGATCTCTGTATCAATCACCATCCACTGGGAAAAGAAGCTTATTTGATG
TGGGATGAGAAGTGCACTTAACN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCTCGATTAAATATGCATCACCACGTT
TTTTAAAGAGGGGACTGACACATAGCCAGACTCTAGAACCTTCTGGACAA
TCTGCAGATAAGCACAAGTTACCAGGGAAACAGCCATGTGATTGGAGGTT
TAAAGTTTGAGGCCCACCATGGCTATTGATTGATTTGATACATAATCCCA
CAGGGTTACGCCTCTACAGAAAACTCAAATATGTGTTGAAAGAGGGGCCT
GGTTGCTATACACGTGGTGCTGGAAGAGGGGAATGTTTTTAAAGAGCATT
AAAGCTCCGTGTATTATTCCCTATATTTTCCCTAAGCTTCTATTCCATCA
GACTTTTCTCCTGCCTACCGAACATAACAAACTGCTAATTCATTAAGTAA
TGTTTCCACTGAATTCTATAGCCATTCTAATCAATGATACAACCAGACCT
TGAGAAGCTGTTAGATTACTGGCCAAATCCTGGACTTGCAGTTGGCACCT
CAATGGGTCAGCCTTCAGCCTGAGTCTTTTACTCGGTGAGATATGCCACT
ATCACCAGGTAAAAAGTTCCAGAATTGATTTAAATTGGCAGACAACTCTT
GGTGTCTGCAGAGACCCGACCACTATGGAAAAATTATACAATTATGATCC

Query= MSMg01no088_m14.b1 MSMg01no088_m14.b1 CHROMAT_FILE:
MSMg01no088_m14.b1 PHD_FILE: MSMg01no088_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:23 2005
         (629 letters)



>mm_chr8_100175862_100176890
          Length = 1029

 Score =  909 bits (470), Expect = 0.0
 Identities = 482/486 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatctatacgaagaagaagctctcagaaaaatgggatattacttcagcagaattt 64
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaattcatctaaatgaagaagaagctctcagaaaaatgggatattacttcagcagaattt 427

                                                                       
Query: 65  cctcagctttggtcagaccgtgtagctcaaaacacagttatagacatattaagtaattta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cctcagctttggtcagaccgtgtagctcaaaacacagttatagacatattaagtaattta 367

                                                                       
Query: 125 aagagatgaaatgtttaaataatatatttagaaataaccgagcattaataaatattaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aagagatgaaatgtttaaataatatatttagaaataaccgagcattaataaatattaaca 307

                                                                       
Query: 185 aacataagtaatgccaagagcggcttcctttgaaaataaattgcgaccagctgcactctt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aacataagtaatgccaagagcggcttcctttgaaaataaattgcgaccagctgcactctt 247

                                                                       
Query: 245 agagcttcatctcaggcagttaagcagcctttacgcttgtatcccctcactactccatgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agagcttcatctcaggcagttaagcagcctttacgcttgtatcccctcactactccatgc 187

                                                                       
Query: 305 tgggattctgtgaggcttgagcttgtagcagtcttgagcctggtgtcacacccgctgaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgggattctgtgaggcttgagcttgtagcagtcttgagcctggtgtcacacccgctgaga 127

                                                                       
Query: 365 gttcagatttgcagccggcctgcgatatccagaaaataatgttccctgtgatcatctgtc 424
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gttcagatttgcagccgccctgcgatatccagaaaataatgttccctgtgatcatctgtc 67

                                                                       
Query: 425 acctctgacccttaagccccacctctatctcccctaatgatccctgagtgtggagggcag 484
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 66  acctctgacccttaagccccacctctatctcccctaatgattcctgagtgtggagggcag 7

                 
Query: 485 gggtgt 490
           ||||||
Sbjct: 6   gggtgt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no088_m14.g1 MSMg01no088_m14.g1 CHROMAT_FILE:
MSMg01no088_m14.g1 PHD_FILE: MSMg01no088_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:23 2005
         (538 letters)



>mm_chr8_100098705_100099642
          Length = 938

 Score =  978 bits (506), Expect = 0.0
 Identities = 530/538 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcgattaaatatgcatcaccacgttttttaaagaggggactgacacatagccagactc 60
           |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 201 cctcgattaaatatgcatcaccacattttttaaagaggggactgagagatagccagactc 260

                                                                       
Query: 61  tagaaccttctggacaatctgcagataagcacaagttaccagggaaacagccatgtgatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagaaccttctggacaatctgcagataagcacaagttaccagggaaacagccatgtgatt 320

                                                                       
Query: 121 ggaggtttaaagtttgaggcccaccatggctattgattgatttgatacataatcccacag 180
           |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaggtttgaagtttgaggcctaccatggctattgattgatttgatacataatcccacag 380

                                                                       
Query: 181 ggttacgcctctacagaaaactcaaatatgtgttgaaagaggggcctggttgctatacac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttacgcctctacagaaaactcaaatatgtgttgaaagaggggcctggttgctatacac 440

                                                                       
Query: 241 gtggtgctggaagaggggaatgtttttaaagagcattaaagctccgtgtattattcccta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggtgctggaagaggggaatgtttttaaagagcattaaagctccgtgtattattcccta 500

                                                                       
Query: 301 tattttccctaagcttctattccatcagacttttctcctgcctaccgaacataacaaact 360
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 501 tattttccctaagcttctattccatcagacttttctcctggttaccgaacataacaaact 560

                                                                       
Query: 361 gctaattcattaagtaatgtttccactgaattctatagccattctaatcaatgatacaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctaattcattaagtaatgtttccactgaattctatagccattctaatcaatgatacaac 620

                                                                       
Query: 421 cagaccttgagaagctgttagattactggccaaatcctggacttgcagttggcacctcaa 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagactttgagaagctgttagattactggccaaatcctggacttgcagttggcacctcaa 680

                                                                     
Query: 481 tgggtcagccttcagcctgagtcttttactcggtgagatatgccactatcaccaggta 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgggtcagccttcagcctgagtcttttactcggtgagatatgccactatcaccaggta 738


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)