XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATTCTTT
TTCAAGCCCAAGGAATCTGCTCTTCATTTAGAAAGAAATTTACAGAATCA
GGTTGTTTGTGTGACCTCTAAGTATTGTTTTGACCCAGGTGGCTTGATAT
ATCATTCAGCCAAATATGATTTTATGTCTGTCTCTTTTCCTTCTTTTCTG
TGCTATGAATTCCCATGAACTCAGAATATTGTCTGTAATATCAAGTCTTG
AATTTTTTTCCTCTGTAATTCTACACTCAATTTTCTGTGAGTTTAAGTTG
TAACTATAATAAACAAGGCTTCCCTTGTAATGTGCTTTAAAAATAGAGAG
AAACACTTCTATTTTTCAATAGTGCTGTTCATAGGTATTGCCGTTTTGAG
AAAAGAGAACGAGGCATGACAAATGTACATGTACTGTACCTGTTCAAATG
TACAGGTATATATGTATATGCCTGTGCTGGTTGACAATGCTCAGAGCTAT
TTGTGAAGTGGAGCTTTCAACTGATCGATCTTCTTTCCCTTTGCATCCTA
AACTCCTTCTTCATTTGCCAATTGCCTGACACTGTTAGAAGATTGCTGTT
GGGCATATGTATGAAGAAGTTAATAATTGCCTTATCTCCTCCATATTTCT
CCACTTAATAACACATGGGCTTGTAAGTGCTCCATGGGAAGA

ATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTGTTTTTCCTAGAAAAAATAGTTCCTCT
TTTTTGATGTTGGTGTTTGCCAAAAACAAAAAAACAAACAAACAAACAAA
CAAATGAACAAACTTCACATCCTTTCCAGAGTCCAGATGAACAAATCCAA
TCCTCTCACTTGTGAATCATATTAGGAAAACCAGGTCTATGAATACCATG
ATGAACATCAAAACTTTAGGGGGTTGCCTTAGCTAGATGATCGAAATTTA
AGTAGCTGAAAATTTACAATTACTTTGTTACTGAATATTTTCCACCTGAT
TTAGAGTGGATTGATGGTTTTTCTCTGAAATTTGGGCCCTTGTCAAGGAA
AACTGACCTGATAAACAATTCAACAGAAAGAAGGAATGAGCCAAAACCAT
TTCATTCAAGTACAGTCTTCTTTTATTTTGTACACGTAATGCCATGCTGC
TTGTAGCCAGCATCATTTATATTTGAGATAAGATCATTATTCTTCACATT
TTGTCTCATCTGTTCTTTAAATGTAGCCATTTAAGGTCCTAGGTACACAT
TCAATTGTTTCCTGTCTGAAGACCAATATTTTTTCCATACTGTAAGGTGA
TTTTTATGATAAGAACTATGGGTTTTCTTGGGAACTAACTAGAATGTG

Query= MSMg01no091_c17.b1 MSMg01no091_c17.b1 CHROMAT_FILE:
MSMg01no091_c17.b1 PHD_FILE: MSMg01no091_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:35 2005
         (497 letters)



>mm_chr8_103869266_103870162
          Length = 897

 Score =  920 bits (476), Expect = 0.0
 Identities = 482/484 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   taagtattgttttgacccaggtggcttgatatatcattcagccaaatatgattttatgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taagtattgttttgacccaggtggcttgatatatcattcagccaaatatgattttatgtc 625

                                                                       
Query: 61  tgtctcttttccttcttttctgtgctatgaattcccatgaactcagaatattgtctgtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtctcttttccttcttttctgtgctatgaattcccatgaactcagaatattgtctgtaa 565

                                                                       
Query: 121 tatcaagtcttgaatttttttcctctgtaattctacactcaattttctgtgagtttaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatcaagtcttgaatttttttcctctgtaattctacactcaattttctgtgagtttaagt 505

                                                                       
Query: 181 tgtaactataataaacaaggcttcccttgtaatgtgctttaaaaatagagagaaacactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtaactataataaacaaggcttcccttgtaatgtgctttaaaaatagagagaaacactt 445

                                                                       
Query: 241 ctatttttcaatagtgctgttcataggtattgccgttttgagaaaagagaacgaggcatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 ctatttttcaatagtgctgttcataggtattgccgttttgagaaaagagaaagaggcatg 385

                                                                       
Query: 301 acaaatgtacatgtactgtacctgttcaaatgtacaggtatatatgtatatgcctgtgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaaatgtacatgtactgtacctgttcaaatgtacaggtatatatgtatatgcctgtgct 325

                                                                       
Query: 361 ggttgacaatgctcagagctatttgtgaagtggagctttcaactgatcgatcttctttcc 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggttgataatgctcagagctatttgtgaagtggagctttcaactgatcgatcttctttcc 265

                                                                       
Query: 421 ctttgcatcctaaactccttcttcatttgccaattgcctgacactgttagaagattgctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttgcatcctaaactccttcttcatttgccaattgcctgacactgttagaagattgctg 205

               
Query: 481 ttgg 484
           ||||
Sbjct: 204 ttgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no091_c17.g1 MSMg01no091_c17.g1 CHROMAT_FILE:
MSMg01no091_c17.g1 PHD_FILE: MSMg01no091_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:35 2005
         (444 letters)



>mm_chr8_103744450_103745293
          Length = 844

 Score =  810 bits (419), Expect = 0.0
 Identities = 431/435 (99%)
 Strand = Plus / Plus

                                                                       
Query: 7   aaaaacaaacaaacaaacaaacaaatgaacaaacttcacatcctttccagagtccagatg 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aaaaacaaacaaacaaacaaacaaatgaacaaacttcacatcctttccagagtccagatg 266

                                                                       
Query: 67  aacaaatccaatcctctcacttgtgaatcatattaggaaaaccaggtctatgaataccat 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aacaaatccaatcctctcacttgtgaatcatattaggaaaaccaggtctatgaataccat 326

                                                                       
Query: 127 gatgaacatcaaaactttagggggttgccttagctagatgatcgaaatttaagtagctga 186
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 327 gatgaacatcaaaactttagggggttgccttagctagatgatcgaaatgtaagtagctga 386

                                                                       
Query: 187 aaatttacaattactttgttactgaatattttccacctgatttagagtggattgatggtt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaatttacaattactttgttactgaatattttccacctgatttagagtggattgatggtt 446

                                                                       
Query: 247 tttctctgaaatttgggcccttgtcaaggaaaactgacctgataaacaattcaacagaaa 306
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 tttctctgaaaattgggcccttgtcaaggaaaactgacctgataaacaattcaacagata 506

                                                                       
Query: 307 gaaggaatgagccaaaaccatttcattcaagtacagtcttcttttattttgtacacgtaa 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaaggaatgagccaaaaccatttcattcaagtacagtcttcttttattttgtacacgtaa 566

                                                                       
Query: 367 tgccatgctgcttgtagccagcatcatttatatttgagataagatcattattcttcacat 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgccatgctgcttgtagccagcatcatttatatttgagataagatcattattcttcacat 626

                          
Query: 427 tttgtctcatctgtt 441
           |||||||||| ||||
Sbjct: 627 tttgtctcatgtgtt 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)