Query= MSMg01no092_d06.b1 MSMg01no092_d06.b1 CHROMAT_FILE:
MSMg01no092_d06.b1 PHD_FILE: MSMg01no092_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:59 2005
(305 letters)
>mm_chr8_43651674_43652379
Length = 706
Score = 563 bits (291), Expect = e-165
Identities = 300/303 (99%), Gaps = 1/303 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttac-atgcggattgtatttaatgccaataatgtctctttactaatgatct 62
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttacaatggggattgtatttaatgccaataatgtctctttactaatgatct 263
Query: 63 acattagttaaacacccttttatttttttcgaattaagataaaagacattctcagactca 122
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acattagttaaacactcttttatttttttcgaattaagataaaagacattctcagactca 323
Query: 123 gatctatgaacatgatgattactccaagaagtttcatcttgtcgaattgtggaacggaag 182
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Sbjct: 324 gatctatgaacatgatgattactccaagaagtttcatcttgtcgaattgtggaacggaag 383
Query: 183 atcacctctgaggtgtgaaatggatggatgctagaaactttttactaattttagttttat 242
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Sbjct: 384 atcacctctgaggtgtgaaatggatggatgctagaaactttttactaattttagttttat 443
Query: 243 aatctttaaaaataggtattaaggtattattctcaacacaatcaactcttagttccaact 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatctttaaaaataggtattaaggtattattctcaacacaatcaactcttagttccaact 503
Query: 303 ctg 305
|||
Sbjct: 504 ctg 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 706
Length adjustment: 9
Effective length of query: 296
Effective length of database: 697
Effective search space: 206312
Effective search space used: 206312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_d06.g1 MSMg01no092_d06.g1 CHROMAT_FILE:
MSMg01no092_d06.g1 PHD_FILE: MSMg01no092_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:59 2005
(109 letters)
>mm_chr8_43815614_43816122
Length = 509
Score = 211 bits (109), Expect = 1e-59
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 1 attggagatagcatttctttgaactggttgcatgattgcacatgatgtcattagagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 attggagatagcatttctttgaactggttgcatgattgcacatgatgtcattagagcttg 250
Query: 61 cctttccagcgagtgaatgagaaaggagagttgtctaggagctggcata 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cctttccagcgagtgaatgagaaaggagagttgtctaggagctggcata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
