Query= MSMg01no092_i08.b1 MSMg01no092_i08.b1 CHROMAT_FILE:
MSMg01no092_i08.b1 PHD_FILE: MSMg01no092_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:24 2005
(269 letters)
>mm_chr8_24559648_24560316
Length = 669
Score = 464 bits (240), Expect = e-135
Identities = 261/268 (97%), Gaps = 2/268 (0%)
Strand = Plus / Plus
Query: 3 cggaattcctgttgttccc-ggatcccccctccccgcaccccctgaggactccactttat 61
|||||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||
Sbjct: 203 cggaattcctgttg-gccctggttcccccctcctcgcaccccctgaggactccactttat 261
Query: 62 agcctaagccttttacccaaaagctttgaatactgtgaagatgttttacattccttctca 121
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agcctaagccttttatacaaaagctttgaatactgtgaagatgttttacattccttctca 321
Query: 122 ttcctgttgtttcttaactacatttgaccagatgttttgatgttatcacgtatgttaata 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcctgttgtttcttaactacatttgaccagatgttttgatgttatcacgtatgttaata 381
Query: 182 gtgattcccaggtgtgttttgttttcatgctttccctgccaatgtattcacttcactaaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgattcccaggtgtgttttgttttcatgctttccctgccaatgtattcacttcactaaa 441
Query: 242 atcactcgatcaataacagcgtgagttg 269
||||||||||||||||||||||||||||
Sbjct: 442 atcactcgatcaataacagcgtgagttg 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_i08.g1 MSMg01no092_i08.g1 CHROMAT_FILE:
MSMg01no092_i08.g1 PHD_FILE: MSMg01no092_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:24 2005
(294 letters)
>mm_chr8_24661965_24662658
Length = 694
Score = 526 bits (272), Expect = e-154
Identities = 293/310 (94%), Gaps = 16/310 (5%)
Strand = Plus / Minus
Query: 1 tttggctgaactgcagaataaaattgaaccatggggccaaagtgggggaaaataacccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttggctgaactgcagaataaaattgaaccatggggccaaagtgggggaaaataacccat 261
Query: 61 aatagaatgatattggtacaagagagagaaaacacaacactccaaagtcgacagagaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatagaatgatattggtacaagagagagaaaacacaacactccaaagtcgacagagaatc 201
Query: 121 catatacagctttcaataattactctgaatattaacagtctcacttccccagtccaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 200 catatacagctttcaataattactctgaatattaacagtctcactcccccagtccaaaaa 141
Query: 181 acaaaaacaaaa----------------caaaacaaaacaaaaaacagcctggtagatga 224
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 140 acaaaaacaaaaacaaaacaaaacaaaacaaaacaaaacaaaaaacagcctggtagatga 81
Query: 225 ctgaattaaaaagcaagcgccagctatgtgttttcttgaagaaatgcatctcatcataaa 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ctgaattaaaaagcaagcgccagctatgtgttttcttgaagaaatgcatctcatcataaa 21
Query: 285 agacagacag 294
||||||||||
Sbjct: 20 agacagacag 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
