Query= MSMg01no092_p08.b1 MSMg01no092_p08.b1 CHROMAT_FILE:
MSMg01no092_p08.b1 PHD_FILE: MSMg01no092_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:59 2005
(310 letters)
>mm_chr8_39388695_39389404
Length = 710
Score = 563 bits (291), Expect = e-165
Identities = 303/309 (98%), Gaps = 5/309 (1%)
Strand = Plus / Plus
Query: 5 gaattcctcc---tttcataattgatttgaaaatagagatgttttaaggacaatattaaa 61
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctccaggtt--ataattgatttgaaaatagagatgttttaaggacaatattaaa 261
Query: 62 taacatctaagattcgggtaagtcactgtattatatttttcatatcctatagtgacttaa 121
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taacatctaagatttgggtaagtcactgtattatatttttcatatcctatagtgacttaa 321
Query: 122 atatgtcaatgaatcatatctgccatcagaaactattcagtttcagaagaccatcttccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atatgtcaatgaatcatatctgccatcagaaactattcagtttcagaagaccatcttccc 381
Query: 182 acgtacatttatatctcaacacactcatctttaaagagaaaagaaacttgggtataagag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acgtacatttatatctcaacacactcatctttaaagagaaaagaaacttgggtataagag 441
Query: 242 catattctgtgatatggtctcacacatttaaaaaatatattgacatttgcatgttcctat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 catattctgtgatatggtctcacacatttaaaaaatatattgacatttgcatgttcctat 501
Query: 302 tatttgata 310
|||||||||
Sbjct: 502 tatttgata 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_p08.g1 MSMg01no092_p08.g1 CHROMAT_FILE:
MSMg01no092_p08.g1 PHD_FILE: MSMg01no092_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:59 2005
(238 letters)
>mm_chr8_39536489_39537127
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1 tttggcccaag-ataattatttcaattgatgtttcgttgaattatgactgctaaatagcc 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttggcccaagaataattatttcaattgatgtttcgttgaattatgactgctaaatagcc 380
Query: 60 ccattcccctatcttgtaatttgaaggaatgtaaatttattatcattgtagtaagttcta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccattcccctatcttgtaatttgaaggaatgtaaatttattatcattgtagtaagttcta 320
Query: 120 ttttaggtaaaaaagtttggaatttgagatcatcatactcctattcttactttttcaata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttttaggtaaaaaagtttggaatttgagatcatcatactcctattcttactttttcaata 260
Query: 180 tgtaccaagatctaccaagatgaacctgggtatatgcagaatacagaccacagagtgtg 238
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 259 tgtaccaagatctaccaagatgaacctgggtatatgcagaatacagagcacagagtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 639
Length adjustment: 9
Effective length of query: 229
Effective length of database: 630
Effective search space: 144270
Effective search space used: 144270
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
