| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-093A24.T7 (MSMg01no093_a24.b1) | MSMg01-093A24.TJ (MSMg01no093_a24.g1) |
|---|
| ACC | AG310601 | AG310602 |
|---|
| length | 1,208 | 1,249 |
|---|
length of high quality
(start - end) | 189 (112 - 300) | 319 (70 - 388) |
|---|
| definition | CHROMAT_FILE: MSMg01no093_a24.b1 PHD_FILE: MSMg01no093_a24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:11 2005 | CHROMAT_FILE: MSMg01no093_a24.g1 PHD_FILE: MSMg01no093_a24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:47:11 2005 |
|---|
| singlet/doublet | --- | singlet |
|---|
| BLAST hit | no hit data | unique |
|---|
| sequence | TATGCGCGCTATAXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATGTT
CAATGTGCTCCCTTTATCTAATAAATGTGGTAATCTTAACACAACCAAGG
CCTTATGCAAAACAAAGTGATTGCTCTTCTTATTTCTCTGCTGAGTTATT
TTTCAAGTGTATTTATTTCTATGTGTGTGTATTTTTTTTTTTTTGCCTGC
ATGTTAATGTGGGCACCACCTGTGTGCAGTTTCCACAAATAATAGAACTG
GTTATCAGATTCCCAGAGACTGGATTTATAGATGCTTCTGCACCTATGGG
GTGCTGGGAATCGAACCCGAGTCCTTCATAAAAGTCAGCTCACTGCCCTT
AACTACTGATCCATTTCCAGCCACCTACTTATTTATTTTCTTTATAACTG
TATTATAAAGAATTTGCAAGTATTATATACAGTCAACTTACGTAGTTCTA
TAGTCTACCTCAGTGAATACAGTTTATATAGCCATTCTGCTACTGTGGTA
CTTCTTGTGTTACTTTTTCCATTTTCTGTTGTATATATTTTTACGCTCTT
ACCTTCTCCTTCTCTTATATTACTTGTCTTAATCCATGTTACTATTGATT
CTTGCTTTTCTTTTTTCTTTTATATCCTCCTTAACGCTTTTTTCTTTGAT
TTGTATTTTTTCATTCTTATTATCTTTTTTTTTTGTTTCTTTGTCTTACT
TCTTCCATATTTTTTTCTTTCTTTCTTTCCTTATTTTTTCTAATCTTTTT
TTTATTTTCTTTTTTCTTTATTTTTTTTCTTTTTACTTATTTTTTATTTC
TTTTATTTTTTCTTTTCTTTTATTTTTTTACATTCTTTTTTCCTTTTTCC
TTTTCCTTCTTTTTATTATCTTCTTTTTTTTTTTTTTTTTTTTTCTTTTT
TTTTTTCTTTCTTCTTTTTTCTACTTTTTTTTATTTTCTTCCCTTTTCTA
TCTTTTTTTTTCCCTTTCCTCTTTTTTTTTATTTTTTTTTATTTTCTTCT
TTTTTTTCTTTATTTTATTTTTTTTTTTTTCTCCCTTTCTCTCTTATTAT
CAATGTTTCTTTTTCTTATTTTATTTCTTCTTTTTTCCTTTCTTTCTTTT
TTTTTCATTTTTCTTTCTTTCTTTTTTTTTCTTCCTTTAATATTCTATTT
ACATCTTCTTATTTCTTTCCTCTTTCTTCTTCCTTAGTTTTCTTAATTAT
TTCTTATA
| TGTTGGGAGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCCTTCTTCCTCAACTACTTCAGATGCATGGCCTAAGCATA
GCCATTTCCTTTCAAAGGTCATGAAGTCAGGGGATGCGGGGGGGGGGTCT
ACTTTAAGGTAAACAACGGGCAAAACGGGTTTCTGTATGTGTTCTTCTTT
ATCCACAAAGAGGAACAATTGTGGTCCCACGATGCTACGTCTGTTAGTAA
ACGGTCAATTCTACACAGCCAGGCAAGACATTAAGTTGGTAGAACACATC
TATGTATTCATTTCATTCATTTCATAGTAGTGAATCTATATATCTGCTGT
TTTATAAACACCTTGATATACGCTATAAGATGTGGATCATATTATTTGTC
TGCATTACTCCTTGAGAAAGGTATTTGACTTCTTCTACTACGATGTTTTC
TGACGCCACTGCATTACGCTACGCTATTGAAGGACAACGTATTTTGTTTG
TATTTCCTTTAATACTGATGTTAATTTTGTATTGTAGTCCAAAACAGTAT
TTATTGTGTTTCCTCCCTGCCTCTGTTACGTTTGCTTGTGTATGTATTTT
CTTTATTGTCTTTTGTCTTCTTTATTTTTTTTTTTTCCTATTGTTTTATA
CTTTCTCTCTTTACTTTTTTGTTTATCCTATTGCTTCACTCTTGATTTTC
CTTTTTTGTTTGATCTGCTCTATTTTTTCTTTCTTTTTCATTTTCATTGT
TTCGCTTTTTTTTTCCTATTTTTTTCTTTTATTTTTTTTTTCTTTCATTT
TTTACTACTTTCCTCTTTTTTTTTTTTTTCTTATTTCTATTTTTTTTCCT
TTTTTTTTCTCCCTTTTCTTAAATCTTTTTTTTTTCTTTTTTTTCTTTTT
TTTCTTTTCCTCTCTCTTAATTATTTTTTTTTATTCTTTTTTTTATCTTC
TATTCTTTTTCTCCTTATTTGTTTCATTTTTTTTTATTTCCTTTTTTTTT
TCTATTTCTTTTTTCTTTTTTTTTTCTATCTTTTTCTTCTTCTTTTCTTT
CCTCTCATTTCTTATTTTATTTCTTTTCTTTCCTTTGTTATACTTTCTTT
GTTCTTTTTCCTCTCTTATTGTTCTACTTTTTTATTACTTATCTTTTCTC
TACCTCCTTATCTCCTTCTTATAACTTTTCTTTATTCTATCTTCTTACTC
TTCATCTTTCTCGTTACAATTTGTACTTCTCCTCTCCTCTTCTTGTCTT
|
|---|
| quality values | Open.Hide. 9 13 8 8 9 9 19 15 13 12 12 9 9 9 10 12 16 24 24 24 14 16 16 19 27 39 39 47 47 47 47 47 47 47 47 48 40 43 43 39 39 43 37 35 32 32 30 35 35 35
26 26 24 30 33 26 21 16 11 11 9 10 9 9 9 13 15 14 28 28 37 39 36 39 39 37 32 32 33 33 42 43 43 43 47 47 47 39 48 48 48 43 43 39 39 35 28 23 12 12
11 9 9 9 12 14 18 23 28 20 20 24 28 23 28 28 28 28 23 28 28 28 28 34 40 43 43 53 47 47 47 47 47 47 68 68 68 50 50 50 57 57 54 54 41 41 50 41 50 48
54 57 57 48 47 47 57 57 57 57 57 57 57 57 57 57 57 50 50 50 38 38 28 35 35 35 39 42 41 47 47 50 57 59 68 68 68 68 68 68 68 59 59 50 44 43 43 43 47 43
43 23 25 25 43 43 43 35 32 24 15 13 13 13 24 28 42 38 38 36 27 12 12 22 27 28 32 17 17 15 38 38 32 23 23 27 33 43 43 43 42 41 33 29 27 27 32 38 22 16
15 21 21 43 26 24 12 12 12 32 32 36 32 23 20 20 20 32 32 43 38 23 23 23 32 44 44 38 24 13 13 13 24 26 38 38 42 38 38 38 38 43 35 43 43 44 32 21 13 18
18 26 18 27 26 24 13 14 12 24 15 12 12 16 16 11 11 11 16 15 22 17 22 22 32 24 12 10 9 9 9 12 10 10 10 10 8 8 8 13 10 8 9 10 10 10 24 30 34 29
19 20 20 27 27 35 24 19 8 8 8 13 23 30 47 29 29 18 18 18 29 28 25 25 28 34 37 37 39 39 47 47 37 37 30 30 21 13 8 8 8 8 8 9 11 12 12 26 27 37
30 39 39 32 30 15 15 13 24 13 14 21 23 28 15 12 11 11 11 10 8 8 8 8 8 8 10 8 9 8 8 8 8 8 8 8 8 8 15 8 10 10 10 11 11 11 12 11 8 8
10 10 11 9 11 12 21 21 21 15 10 8 8 8 10 10 12 11 11 9 11 11 15 18 12 11 11 15 20 15 13 13 18 21 28 31 21 16 8 8 8 8 8 10 18 10 8 6 6 8
8 10 17 15 18 18 16 12 9 9 9 10 8 8 13 17 23 11 12 11 12 17 10 10 10 19 21 28 23 11 11 8 8 8 14 16 13 13 8 10 8 8 8 8 8 8 8 10 10 8
8 9 8 8 8 8 8 10 6 7 10 10 10 6 7 8 8 11 10 10 10 10 10 13 10 8 8 8 8 11 8 10 8 10 8 8 8 8 10 8 8 6 6 6 6 6 11 9 10 8
8 8 8 8 6 6 8 8 8 8 8 8 10 10 9 8 10 8 9 14 8 9 9 9 9 9 9 13 13 18 15 21 11 11 11 9 9 10 12 13 14 21 13 10 8 8 8 8 8 6
8 8 8 9 9 9 10 11 10 10 10 10 11 10 13 13 8 8 8 8 8 13 9 11 12 23 19 25 22 24 20 21 21 12 12 11 8 13 7 7 8 8 8 9 10 8 8 8 8 8
10 8 8 8 8 7 7 9 9 10 10 10 10 8 11 7 6 8 8 8 8 10 10 10 10 10 13 8 8 9 8 8 8 8 8 10 10 10 6 6 8 8 8 8 8 8 8 11 21 12
12 10 9 9 12 10 10 12 9 13 13 11 13 10 9 8 8 12 8 9 10 10 22 19 22 13 13 8 8 8 10 9 13 7 7 8 11 6 6 8 15 10 10 11 10 10 10 10 11 9
9 10 10 8 8 8 8 9 13 13 11 11 11 17 15 11 11 11 16 16 11 11 10 10 8 8 8 12 8 8 7 9 12 12 13 11 16 13 8 8 8 8 8 8 10 11 11 8 8 8
8 8 12 6 6 8 8 8 6 6 8 8 9 11 10 10 10 10 9 8 9 8 8 8 8 8 12 12 13 19 21 21 10 10 10 9 9 12 10 11 10 10 11 9 9 12 12 11 9 9
12 12 16 10 10 6 6 8 8 10 11 12 13 10 12 10 17 10 10 8 8 8 8 10 11 11 14 18 11 11 12 10 10 10 15 10 8 8 8 8 8 8 8 10 8 8 6 6 8 8
8 8 8 10 14 10 10 10 10 8 8 8 8 8 9 10 9 9 8 8 10 10 15 15 23 23 28 13 14 9 9 8 8 8 8 8 8 10 10 10 10 10 8 8 10 10 10 10 9 9
10 12 19 19 10 12 10 13 12 13 9 8 8 8 8 6 6 6 10 13 11 12 12 10 10 8 8 9 9 9 10 11 12 11 11 9 8 8 8 8 8 8 8 8 8 8 8 6 6 8
6 6 8 8 9 9 17 17 17 10 10 10 9 9 9 10 9 10 11 8 8 6 6 8 8 15 19 13 9 9 9 10 9 11 12 9 9 10 12 12 8 10 10 16 16 11 11 11 20 25
18 13 9 8 8 8 8 8 10 10 10 7 7 8 8 11 21 10 10 6 6 8 11 13 15 13 14 10 8 8 8 8 7 6 8 8 17 8 8 6 6 6 6 8 11 7 6 8 8 8
6 6 8 8 9 9 9 12 11 11 11 11 11 13 10 10 10 10 8 8 8 8 10 8 8 12 12 9 7 10 8 10 10 13 8 7 7 9 11 11 11 8 8 6 6 8 8 10 11 12
13 10 10 10 8 8 8 8 | Open.Hide. 6 6 6 6 8 8 8 8 8 7 7 7 10 12 9 10 10 16 15 8 8 6 8 10 15 24 17 22 10 10 10 15 13 15 9 15 13 22 22 29 29 37 37 42 36 36 33 33 36 43
43 59 59 59 46 41 23 19 9 9 9 10 13 14 18 19 16 20 22 22 28 22 29 29 28 30 30 35 36 36 50 50 50 57 57 42 42 33 38 33 39 43 46 46 43 40 37 23 23 11
10 9 10 10 10 18 25 33 33 37 37 32 31 30 39 33 39 32 34 24 24 22 24 18 24 22 19 19 19 32 43 35 36 43 43 43 42 37 41 30 30 41 41 43 43 33 33 32 37 37
41 47 47 57 42 39 32 32 30 44 42 44 43 43 43 43 42 44 43 43 32 31 20 20 26 41 36 29 42 40 47 57 57 59 57 57 57 59 57 44 43 43 50 50 54 57 57 57 57 57
57 57 57 43 37 35 32 43 42 41 43 35 35 29 43 43 52 43 44 43 35 35 43 43 43 27 32 23 27 28 32 43 42 32 33 28 33 24 43 43 52 52 52 43 47 27 24 13 13 18
38 27 33 31 42 43 35 35 39 43 43 43 57 35 37 38 43 37 24 24 13 13 13 24 27 32 32 32 23 22 22 43 32 32 32 38 38 19 16 16 32 36 32 43 43 43 43 43 44 44
44 43 43 35 43 43 50 57 43 43 42 44 42 35 32 32 30 20 20 22 32 29 24 20 20 32 32 16 18 18 30 32 42 44 44 44 37 37 37 39 37 43 43 42 43 41 41 30 30 30
39 28 32 15 15 11 12 12 13 13 21 24 37 42 42 42 30 30 15 15 15 22 22 19 23 12 11 10 12 16 27 33 32 30 30 32 28 18 12 11 9 12 11 12 11 16 16 11 11 27
27 16 20 20 30 30 40 39 43 43 43 39 27 27 12 12 12 18 18 22 21 21 29 26 23 16 19 16 19 19 19 19 24 32 32 30 16 11 10 10 10 10 10 13 13 17 24 27 15 15
11 11 10 10 11 13 10 13 10 13 13 10 9 10 17 10 10 10 11 16 16 12 11 11 13 21 23 24 21 13 13 12 12 12 10 9 9 9 8 13 8 8 8 15 8 6 6 8 8 10
11 13 22 26 16 13 10 10 8 10 12 13 9 10 10 16 16 8 8 8 8 8 8 9 10 12 19 12 12 10 10 8 11 8 8 8 8 9 9 9 11 11 12 12 12 8 8 6 7 8
8 8 8 8 8 8 8 8 8 8 10 18 21 16 15 13 13 8 8 8 6 6 8 8 11 11 12 11 11 11 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 10 14 12 10
10 10 9 9 10 8 10 15 13 10 10 8 8 8 8 8 8 15 21 15 15 10 8 6 6 10 8 8 8 8 11 12 11 10 11 10 10 13 9 9 9 9 11 11 8 10 7 7 8 8
6 6 10 8 9 9 9 9 8 8 8 8 10 10 12 10 10 10 10 8 8 8 13 15 8 8 8 8 8 8 8 8 8 6 7 10 8 8 8 8 6 6 6 6 8 8 8 8 6 6
6 6 8 10 26 19 12 9 9 10 10 8 8 8 8 6 6 8 8 8 8 6 6 8 10 12 10 8 8 8 8 10 10 8 8 13 14 10 10 11 10 15 17 10 10 10 10 12 12 12
13 9 9 9 10 10 13 11 9 8 12 14 16 16 10 13 11 11 11 11 10 10 10 10 8 8 8 10 12 8 8 8 8 10 13 10 10 10 10 10 10 11 8 8 6 6 8 8 12 9
10 10 8 6 6 8 8 10 16 16 22 10 12 9 9 8 12 10 10 11 13 11 11 12 12 13 10 12 12 10 10 10 9 8 12 6 6 8 8 9 10 13 13 16 15 16 10 10 10 10
12 18 12 18 15 18 13 10 10 9 8 8 8 10 8 9 11 11 9 10 9 10 10 10 10 10 10 10 11 11 18 13 9 9 9 9 9 10 10 11 11 13 12 10 10 8 12 16 21 12
8 8 8 8 8 8 16 17 9 9 9 10 10 10 9 10 10 10 9 9 9 13 10 10 10 11 9 13 13 13 13 10 8 8 6 6 8 8 8 8 11 8 8 6 6 8 8 10 10 8
8 6 6 6 6 8 8 9 9 10 10 10 10 8 10 6 6 6 10 9 11 11 12 15 11 10 10 10 10 10 11 11 10 10 10 10 12 15 11 11 11 11 11 12 11 11 11 12 8 8
8 6 6 8 8 10 9 10 10 15 10 10 10 10 13 11 10 8 8 8 8 9 9 12 15 15 15 9 10 8 9 13 13 11 10 9 8 8 6 6 8 8 10 12 8 12 7 8 10 8
8 9 9 9 9 10 9 8 8 8 8 8 8 9 9 9 9 9 15 10 12 10 9 11 11 10 10 11 10 10 8 8 8 8 11 9 8 8 8 8 8 8 10 10 8 8 12 10 10 6
6 8 10 10 10 8 13 12 10 9 10 11 11 11 11 12 12 12 11 11 8 8 8 8 8 8 8 11 18 17 12 12 8 8 10 8 8 6 6 8 8 8 8 13 13 7 8 8 8 8
6 6 6 8 8 10 10 12 11 9 8 7 6 6 6 6 8 8 8 8 7 6 8 8 8 10 8 8 10 10 10 12 7 7 8 10 9 9 8 8 8 8 10 8 8 8 6 8 6 6
8 8 8 19 19 13 13 13 8 8 6 7 8 8 8 10 8 8 6 6 8 8 6 6 6 6 6 10 7 7 8 10 13 13 12 8 8 8 8 8 14 14 19 11 11 11 12 12 12 |
|---|
